Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS50Q96JG6 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS50Q96JG6 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS50Q96JG6 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS50Q96JG6 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC007342.7-201ENST00000624610 2337 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS50Q96JG6 OR13C1P-202ENST00000641378 2919 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS50Q96JG6 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 RNU1-150P-201ENST00000362491 162 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 RNA5SP105-201ENST00000391123 113 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS50Q96JG6 HMGB3P7-201ENST00000400214 611 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 AL512422.1-201ENST00000407033 553 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 GPS2P1-201ENST00000411761 986 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 MTATP6P20-201ENST00000414147 562 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 BMS1P13-201ENST00000417301 885 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 AL449283.1-202ENST00000418249 604 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC023128.2-201ENST00000420880 1223 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 OSTCP5-201ENST00000425293 453 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 AL035246.1-201ENST00000433554 1255 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC093716.1-201ENST00000435923 377 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC245047.2-201ENST00000441060 530 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC020898.1-201ENST00000474167 787 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC113420.1-201ENST00000507903 571 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC093752.1-206ENST00000511823 336 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC013701.1-201ENST00000522657 465 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 DUXAP5-201ENST00000529668 529 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC018552.1-201ENST00000562099 811 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 DPRXP4-201ENST00000578053 568 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 AL355493.4-201ENST00000618530 292 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC022079.2-201ENST00000619739 566 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC008115.4-201ENST00000619780 775 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 AL691477.1-201ENST00000624398 162 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 AC019226.2-201ENST00000625973 424 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 MFSD8-220ENST00000641243 1422 ntBASIC5.53□□□□□ -1.52
VPS50Q96JG6 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS50Q96JG6 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS50Q96JG6 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS50Q96JG6 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
VPS50Q96JG6 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS50Q96JG6 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS50Q96JG6 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS50Q96JG6 RNU5B-1-201ENST00000363286 116 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 RNA5SP211-201ENST00000365516 117 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 RN7SKP292-201ENST00000365522 317 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 SNORA70.6-201ENST00000383934 134 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 RNA5SP296-201ENST00000410523 111 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 AL590806.1-201ENST00000415818 853 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 RPS4XP5-201ENST00000419038 768 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 MTND2P16-201ENST00000419987 799 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 XKRYP1-201ENST00000423438 492 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 AL022331.1-201ENST00000429025 477 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 XKRYP2-201ENST00000432915 492 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.52□□□□□ -1.53
VPS50Q96JG6 AL591719.1-201ENST00000444669 744 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 AL096803.2-201ENST00000450032 677 ntBASIC5.52□□□□□ -1.53
VPS50Q96JG6 YWHAEP1-201ENST00000453697 763 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms