Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC079168.2-201ENST00000453977 416 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC091959.2-201ENST00000477363 321 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 SNORA74D-201ENST00000516404 141 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC009852.2-201ENST00000567898 485 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC023389.2-201ENST00000580031 955 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 uc_338.7-201ENST00000621834 124 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 MIR492-201ENST00000638676 116 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC073136.1-201ENST00000449426 2884 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC046176.1-201ENST00000435260 1170 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AL450023.3-201ENST00000440592 271 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC108475.1-201ENST00000507880 950 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 TRAV8-5-201ENST00000537369 341 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC090286.3-201ENST00000573133 187 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 MIR6875-201ENST00000617506 72 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC011815.3-201ENST00000624194 473 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 SNORA73.1-201ENST00000363107 205 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 OR13Z1P-201ENST00000416141 834 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 RN7SL558P-201ENST00000497468 299 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AGGF1P6-201ENST00000569213 976 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AL162574.1-201ENST00000615702 950 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 TTC3P1-201ENST00000399586 6081 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AL592182.3-201ENST00000642132 3304 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AL022722.2-201ENST00000402519 180 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 RNU6-628P-201ENST00000410675 107 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC053481.1-201ENST00000467217 306 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 MTND4LP2-201ENST00000502312 285 ntBASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ALMS1Q8TCU4 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
ALMS1Q8TCU4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC3.21□□□□□ -1.89
ALMS1Q8TCU4 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
ALMS1Q8TCU4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
ALMS1Q8TCU4 AC023632.6-201ENST00000624338 2177 ntBASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 OR5P1P-201ENST00000299512 925 ntBASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 TCEA1P3-201ENST00000443005 880 ntBASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 UQCRHP4-201ENST00000471686 272 ntBASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 AL359219.2-201ENST00000555184 348 ntBASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 AC008739.3-201ENST00000603262 127 ntBASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 AC140479.6-201ENST00000633535 357 ntBASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
ALMS1Q8TCU4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms