Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 AC063943.1-201ENST00000465434 453 ntBASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 AC116562.1-201ENST00000485355 781 ntBASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 RPS23P1-201ENST00000491662 432 ntBASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 GAPDHP56-201ENST00000506031 988 ntBASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 HMGB3P16-201ENST00000508037 287 ntBASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 MORF4L1P3-201ENST00000525966 950 ntBASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 BGLT3-201ENST00000564523 994 ntBASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 AL049794.2-201ENST00000616301 365 ntBASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.41□□□□□ -1.7
FNDC9Q8TBE3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.4□□□□□ -1.7
FNDC9Q8TBE3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.4□□□□□ -1.7
FNDC9Q8TBE3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.4□□□□□ -1.7
FNDC9Q8TBE3 AC139713.2-215ENST00000641428 5037 ntBASIC4.4□□□□□ -1.7
FNDC9Q8TBE3 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
FNDC9Q8TBE3 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
FNDC9Q8TBE3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 SNORA73.1-201ENST00000363107 205 ntBASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 RN7SKP16-201ENST00000410180 299 ntBASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 SETP15-201ENST00000412724 337 ntBASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 GTF2IP5-201ENST00000414608 731 ntBASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 OR5M12P-201ENST00000423388 929 ntBASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 OR2AH1P-201ENST00000425717 928 ntBASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AL049745.1-201ENST00000433953 286 ntBASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 EIF4A2P5-201ENST00000529914 499 ntBASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AP005262.1-201ENST00000582646 997 ntBASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AC020910.3-201ENST00000603701 874 ntBASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AC015914.2-201ENST00000618167 288 ntBASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 AC099654.3-201ENST00000447087 1546 ntBASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FNDC9Q8TBE3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 MIR1271-201ENST00000408537 86 ntBASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 RPL35AP21-201ENST00000437667 333 ntBASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 SCAND3P1-201ENST00000439854 1060 ntBASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 SLC25A18P1-201ENST00000449385 454 ntBASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 RPL23AP56-201ENST00000460778 453 ntBASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 RPS17P2-201ENST00000461663 408 ntBASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 AC090142.2-201ENST00000483263 416 ntBASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 AC091544.1-201ENST00000484702 348 ntBASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 RNU6-964P-201ENST00000516524 69 ntBASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 AC105031.1-201ENST00000518550 476 ntBASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 DDX18P6-201ENST00000450119 1997 ntBASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
FNDC9Q8TBE3 TET1P1-201ENST00000426627 2301 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms