Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 IMMP1LP3-201ENST00000604197 224 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 AC126915.2-201ENST00000610957 190 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 CASC19-222ENST00000641321 1173 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 MAPK10-349ENST00000641767 3661 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 AC009643.2-201ENST00000603543 1448 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 UBBP2-201ENST00000376781 231 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 SLC35E1P1-201ENST00000419313 864 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 SCAND3P1-201ENST00000439854 1060 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 RPL34P20-201ENST00000442771 351 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 FAR2P1-206ENST00000449736 709 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 OR52Y1P-201ENST00000452418 828 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 GYG1P1-201ENST00000460864 698 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 IGKV2-18-201ENST00000522607 343 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 IGKV3D-34-201ENST00000522638 302 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 CYCSP40-201ENST00000575927 294 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 BMS1P21-201ENST00000634565 365 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 AC126323.6-202ENST00000568092 3511 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 SALL4P2-201ENST00000423288 2910 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 Z95327.2-201ENST00000414579 1873 ntBASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLHC1Q8NHS4 AC091046.3-201ENST00000631455 1574 ntBASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AC093719.1-202ENST00000392735 373 ntBASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 ATP5HP3-201ENST00000396994 486 ntBASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 CHEK2P5-201ENST00000423877 246 ntBASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AL035551.1-201ENST00000446931 348 ntBASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AL354714.3-201ENST00000447284 493 ntBASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 CCDC75P1-201ENST00000469247 791 ntBASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 PGBD4P4-201ENST00000509673 613 ntBASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 ENPP7P9-201ENST00000514456 627 ntBASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 HMGB1P19-201ENST00000517578 577 ntBASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 IGLVIV-64-201ENST00000518581 301 ntBASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AC095055.1-201ENST00000603472 1113 ntBASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AC099494.2-201ENST00000623371 978 ntBASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.74□□□□□ -1.65
CLHC1Q8NHS4 AC107068.1-201ENST00000563286 4218 ntBASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLHC1Q8NHS4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms