Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL353777.1-201ENST00000425552 326 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 SAR1AP4-201ENST00000429225 591 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 FO393419.1-201ENST00000443746 355 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC239798.1-201ENST00000449024 1176 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 GAPDHP14-201ENST00000450472 937 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 PYM1-204ENST00000454792 884 ntTSL 2 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 RNU6-261P-201ENST00000459506 102 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC234782.3-201ENST00000461229 433 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC104563.1-201ENST00000476147 376 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 ENPP7P3-201ENST00000509123 241 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 OR10J9P-201ENST00000511932 987 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC026700.1-201ENST00000512074 544 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC104986.1-201ENST00000517978 436 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC022616.6-201ENST00000520479 119 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AL109766.1-201ENST00000555080 552 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC037471.2-201ENST00000564941 598 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AL078601.3-201ENST00000573303 535 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC099489.2-201ENST00000574976 260 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 MIR4793-201ENST00000577502 87 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 SNORD39.3-201ENST00000584451 71 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 BOLA2P1-201ENST00000584794 232 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AL589863.1-201ENST00000595383 631 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AL161729.3-201ENST00000603533 673 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 BX664608.1-201ENST00000610519 487 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC068726.1-201ENST00000610993 341 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AL133173.2-201ENST00000614270 90 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC090527.3-201ENST00000619041 548 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC005790.1-201ENST00000619774 450 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 NMD3P1-201ENST00000439704 1488 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 MFSD8-227ENST00000641393 4069 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AL353795.1-201ENST00000439134 1775 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC217777.1-201ENST00000570034 1471 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 RNU6-984P-201ENST00000363236 109 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 RNU6-730P-201ENST00000383954 104 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 RNU6-332P-201ENST00000391193 108 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AL359704.1-201ENST00000411586 781 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 GSTA10P-201ENST00000412182 576 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 OR9R1P-201ENST00000412200 877 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 MRPL50P2-201ENST00000416821 482 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 PDCL2P1-201ENST00000419302 352 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC009303.1-201ENST00000426307 352 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 TAAR7P-201ENST00000436141 242 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC140076.1-201ENST00000449897 361 ntBASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC6.94□□□□□ -1.3
DEPDC4Q8N2C3 AL390728.3-201ENST00000452704 270 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms