Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RNU6-618P-201ENST00000363518 112 ntBASIC6.46□□□□□ -1.38
SYNE4Q8N205 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE4Q8N205 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE4Q8N205 AL589994.1-201ENST00000404962 340 ntBASIC6.46□□□□□ -1.38
SYNE4Q8N205 AC005005.2-201ENST00000420779 380 ntBASIC6.46□□□□□ -1.38
SYNE4Q8N205 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNE4Q8N205 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.46□□□□□ -1.38
SYNE4Q8N205 KNOP1P3-201ENST00000446933 426 ntBASIC6.46□□□□□ -1.38
SYNE4Q8N205 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNE4Q8N205 AC104164.3-201ENST00000467363 1258 ntBASIC6.46□□□□□ -1.38
SYNE4Q8N205 RPL7P41-201ENST00000485823 957 ntBASIC6.46□□□□□ -1.38
SYNE4Q8N205 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC6.46□□□□□ -1.38
SYNE4Q8N205 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNE4Q8N205 RNU6-760P-201ENST00000516078 97 ntBASIC6.46□□□□□ -1.38
SYNE4Q8N205 OR4A17P-201ENST00000526032 904 ntBASIC6.46□□□□□ -1.38
SYNE4Q8N205 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNE4Q8N205 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNE4Q8N205 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE4Q8N205 MIR4737-201ENST00000583979 81 ntBASIC6.46□□□□□ -1.38
SYNE4Q8N205 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE4Q8N205 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.46□□□□□ -1.38
SYNE4Q8N205 VN1R81P-201ENST00000602085 372 ntBASIC6.46□□□□□ -1.38
SYNE4Q8N205 AC068790.4-201ENST00000602474 263 ntBASIC6.46□□□□□ -1.38
SYNE4Q8N205 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE4Q8N205 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE4Q8N205 AC083809.1-201ENST00000615051 472 ntBASIC6.46□□□□□ -1.38
SYNE4Q8N205 AP000676.4-201ENST00000624659 623 ntBASIC6.46□□□□□ -1.38
SYNE4Q8N205 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNE4Q8N205 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE4Q8N205 AP000547.3-204ENST00000588548 2523 ntBASIC6.46□□□□□ -1.38
SYNE4Q8N205 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE4Q8N205 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNE4Q8N205 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE4Q8N205 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE4Q8N205 AC092070.2-203ENST00000598377 3644 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 AC007996.1-201ENST00000620414 2821 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE4Q8N205 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE4Q8N205 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 RN7SKP113-201ENST00000363891 295 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE4Q8N205 SNORD116-2-201ENST00000384274 95 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 SNORD116-6-201ENST00000384711 96 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 NPM1P40-201ENST00000412758 733 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 RPS21P8-201ENST00000413365 247 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE4Q8N205 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE4Q8N205 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 HSPD1P12-201ENST00000429127 1069 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 RNFT1P2-201ENST00000443064 757 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE4Q8N205 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 AC079168.1-201ENST00000458741 345 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 AC096992.1-201ENST00000459808 709 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 OR2A3P-201ENST00000493774 953 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 C1DP5-201ENST00000525775 383 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 AC090116.1-201ENST00000615679 446 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 AC084824.4-201ENST00000620106 731 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 AC095038.2-201ENST00000621464 1070 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE4Q8N205 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE4Q8N205 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE4Q8N205 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE4Q8N205 AL137058.3-201ENST00000624531 3099 ntBASIC6.45□□□□□ -1.38
SYNE4Q8N205 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE4Q8N205 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNE4Q8N205 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE4Q8N205 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE4Q8N205 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE4Q8N205 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE4Q8N205 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE4Q8N205 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 AL360270.2-201ENST00000562952 5985 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 RNA5SP505-201ENST00000364748 108 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 DDX39BP1-205ENST00000422507 192 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 MTND4LP14-201ENST00000429447 288 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE4Q8N205 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE4Q8N205 AL392003.1-201ENST00000434394 243 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms