Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 SDAD1P1-202ENST00000524156 2051 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 RNU6-249P-201ENST00000363016 102 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 RNA5SP428-201ENST00000365129 132 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 AC013442.1-201ENST00000397347 228 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 AL021331.1-201ENST00000402817 582 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 Y_RNA.625-201ENST00000411256 107 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 RPA2P2-201ENST00000419698 796 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 AL137845.2-201ENST00000444292 988 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 H2AFZP6-201ENST00000444403 394 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 AP000942.1-201ENST00000463969 747 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 RPS12P31-201ENST00000491419 398 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 AC111000.5-201ENST00000506559 1178 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 RNA5SP303-201ENST00000516192 130 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 HMGB1P19-201ENST00000517578 577 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 OR10D4P-201ENST00000525892 951 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 AC008033.2-201ENST00000542626 177 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RAB43Q86YS6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 AL627230.1-201ENST00000613077 211 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 AL591926.8-201ENST00000616876 211 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 AC015914.2-201ENST00000618167 288 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RAB43Q86YS6 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAB43Q86YS6 RBPJP2-201ENST00000618187 1444 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 SMG1P7-201ENST00000565246 2704 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAB43Q86YS6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RAB43Q86YS6 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAB43Q86YS6 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAB43Q86YS6 TTC39DP-201ENST00000416781 1688 ntBASIC4.77□□□□□ -1.65
RAB43Q86YS6 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAB43Q86YS6 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAB43Q86YS6 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAB43Q86YS6 RNU4-44P-201ENST00000363050 141 ntBASIC4.77□□□□□ -1.65
RAB43Q86YS6 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 USP9YP9-201ENST00000429406 715 ntBASIC4.77□□□□□ -1.65
RAB43Q86YS6 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 OR7E125P-201ENST00000443450 846 ntBASIC4.77□□□□□ -1.65
RAB43Q86YS6 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 AC108161.1-201ENST00000461060 402 ntBASIC4.77□□□□□ -1.65
RAB43Q86YS6 AC093890.1-201ENST00000502554 540 ntBASIC4.77□□□□□ -1.65
RAB43Q86YS6 AC097173.1-201ENST00000505862 819 ntBASIC4.77□□□□□ -1.65
RAB43Q86YS6 AC092593.2-201ENST00000513866 913 ntBASIC4.77□□□□□ -1.65
RAB43Q86YS6 RN7SKP5-201ENST00000517045 272 ntBASIC4.77□□□□□ -1.65
RAB43Q86YS6 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 AC021006.3-201ENST00000530771 192 ntBASIC4.77□□□□□ -1.65
RAB43Q86YS6 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 RNU6-84P-201ENST00000607737 102 ntBASIC4.77□□□□□ -1.65
RAB43Q86YS6 AC087385.3-201ENST00000620477 187 ntBASIC4.77□□□□□ -1.65
RAB43Q86YS6 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAB43Q86YS6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAB43Q86YS6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RAB43Q86YS6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RAB43Q86YS6 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RAB43Q86YS6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.76□□□□□ -1.65
RAB43Q86YS6 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RAB43Q86YS6 MTCO1P46-201ENST00000451639 1491 ntBASIC4.76□□□□□ -1.65
RAB43Q86YS6 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.76□□□□□ -1.65
RAB43Q86YS6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RAB43Q86YS6 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RAB43Q86YS6 RNA5SP87-201ENST00000384155 118 ntBASIC4.76□□□□□ -1.65
RAB43Q86YS6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.76□□□□□ -1.65
RAB43Q86YS6 RN7SKP199-201ENST00000410325 305 ntBASIC4.76□□□□□ -1.65
RAB43Q86YS6 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.76□□□□□ -1.65
RAB43Q86YS6 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.76□□□□□ -1.65
RAB43Q86YS6 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.76□□□□□ -1.65
RAB43Q86YS6 AC092447.2-201ENST00000435487 669 ntBASIC4.76□□□□□ -1.65
RAB43Q86YS6 NPM1P48-201ENST00000436002 853 ntBASIC4.76□□□□□ -1.65
RAB43Q86YS6 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RAB43Q86YS6 AC112498.1-201ENST00000444401 332 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms