Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC092747.2-201ENST00000545069 983 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC122134.1-201ENST00000565664 1104 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC007151.1-201ENST00000572774 483 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC024267.2-201ENST00000582737 417 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC010487.1-201ENST00000594408 1172 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 CYCSP1-201ENST00000604815 315 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC069304.2-201ENST00000605154 435 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AL513218.1-201ENST00000606527 391 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AP001437.1-201ENST00000608783 456 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC099676.1-201ENST00000608886 657 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AL590282.1-201ENST00000610379 1136 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC004241.2-201ENST00000614562 444 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AL359880.1-201ENST00000621879 266 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AL139384.2-201ENST00000613809 3590 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AP000866.6-201ENST00000638898 3579 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC138393.1-206ENST00000540997 1886 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC135352.1-201ENST00000506173 1418 ntBASIC6.06□□□□□ -1.44
ATG4DQ86TL0 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG4DQ86TL0 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC022905.1-201ENST00000503430 3048 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 MKI67P1-201ENST00000604297 1460 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 Y_RNA.144-201ENST00000363521 113 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 RNA5SP27-201ENST00000363839 119 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 Y_RNA.216-201ENST00000364205 93 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 MIR606-201ENST00000384851 96 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 CYCSP45-201ENST00000402289 315 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AL359694.1-201ENST00000403247 604 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC004987.3-201ENST00000413879 771 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC019050.1-201ENST00000418508 492 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC000089.1-201ENST00000424559 801 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 MTCO1P3-201ENST00000429327 192 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AL365184.2-201ENST00000431139 435 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 DEFA9P-201ENST00000433042 285 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 RPL3P11-201ENST00000434028 1146 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC013403.1-201ENST00000436954 263 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 GAPDHP20-201ENST00000444107 1007 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 RPL31P11-202ENST00000454082 372 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 RAD23BP3-201ENST00000454157 1152 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC022364.2-201ENST00000457963 554 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 DUTP7-201ENST00000507982 486 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 IGLV3-6-201ENST00000523937 250 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC007068.2-201ENST00000543168 395 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AL137000.1-201ENST00000610528 1244 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AL592295.2-201ENST00000612578 206 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC061999.1-201ENST00000624454 177 ntBASIC6.05□□□□□ -1.44
ATG4DQ86TL0 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.05□□□□□ -1.44
ATG4DQ86TL0 AC027559.1-201ENST00000636288 271 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms