Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC087385.3-201ENST00000620477 187 ntBASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 AP003499.2-201ENST00000624100 483 ntBASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 AL731566.1-201ENST00000620490 1937 ntBASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3CQ6NXT2 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 AC083843.2-201ENST00000568248 6253 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 AC000374.1-201ENST00000434698 1745 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 RNA5SP223-201ENST00000365174 120 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 SNORA2.3-201ENST00000383920 135 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 RNA5SP87-201ENST00000384155 118 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 IGHV5-78-201ENST00000450948 295 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 AC091685.2-201ENST00000454924 864 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 snoU13.20-201ENST00000459180 104 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 RN7SL346P-201ENST00000491561 294 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 RN7SL441P-201ENST00000492388 296 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 AC098976.1-201ENST00000513014 541 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 AC021006.3-201ENST00000530771 192 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 CD24P2-201ENST00000565486 219 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 AL137072.1-201ENST00000603444 466 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 BNIP3P35-201ENST00000604530 490 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 AP001521.2-201ENST00000608772 546 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 AC091953.3-201ENST00000623220 236 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 AC233968.1-201ENST00000611212 1300 ntBASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3CQ6NXT2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 RN7SKP103-201ENST00000363848 320 ntBASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 ATP5HP3-201ENST00000396994 486 ntBASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 COX6CP13-201ENST00000428703 226 ntBASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 AL049745.1-201ENST00000433953 286 ntBASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 RPL7P11-201ENST00000437586 658 ntBASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 PRPF38AP2-201ENST00000438179 851 ntBASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 NPM1P39-201ENST00000449818 867 ntBASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 AC245028.2-201ENST00000458673 253 ntBASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 AC010350.1-201ENST00000504908 231 ntBASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 GAPDHP56-201ENST00000506031 988 ntBASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 RFPL4AP5-201ENST00000514977 504 ntBASIC4.66□□□□□ -1.66
H3F3CQ6NXT2 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms