Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.83□□□□□ -1.48
RFX7Q2KHR2 MIR5699-201ENST00000578903 90 ntBASIC5.83□□□□□ -1.48
RFX7Q2KHR2 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.83□□□□□ -1.48
RFX7Q2KHR2 AL121932.1-201ENST00000605542 214 ntBASIC5.83□□□□□ -1.48
RFX7Q2KHR2 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.83□□□□□ -1.48
RFX7Q2KHR2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.83□□□□□ -1.48
RFX7Q2KHR2 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
RFX7Q2KHR2 AC007382.1-201ENST00000624376 2618 ntBASIC5.83□□□□□ -1.48
RFX7Q2KHR2 TLK1P1-201ENST00000456760 2440 ntBASIC5.83□□□□□ -1.48
RFX7Q2KHR2 AC003985.2-201ENST00000562268 1669 ntBASIC5.83□□□□□ -1.48
RFX7Q2KHR2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFX7Q2KHR2 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.83□□□□□ -1.48
RFX7Q2KHR2 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFX7Q2KHR2 NCLP2-201ENST00000416078 1462 ntBASIC5.83□□□□□ -1.48
RFX7Q2KHR2 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RFX7Q2KHR2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
RFX7Q2KHR2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFX7Q2KHR2 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFX7Q2KHR2 SOCS5P3-201ENST00000425115 1576 ntBASIC5.83□□□□□ -1.48
RFX7Q2KHR2 CASC19-206ENST00000641028 1430 ntBASIC5.82□□□□□ -1.48
RFX7Q2KHR2 SNORA70F-201ENST00000384142 135 ntBASIC5.82□□□□□ -1.48
RFX7Q2KHR2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.82□□□□□ -1.48
RFX7Q2KHR2 FABP7P1-201ENST00000424004 391 ntBASIC5.82□□□□□ -1.48
RFX7Q2KHR2 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
RFX7Q2KHR2 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.82□□□□□ -1.48
RFX7Q2KHR2 RPS17P8-201ENST00000434525 335 ntBASIC5.82□□□□□ -1.48
RFX7Q2KHR2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.82□□□□□ -1.48
RFX7Q2KHR2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.82□□□□□ -1.48
RFX7Q2KHR2 MRPL48P1-201ENST00000445390 636 ntBASIC5.82□□□□□ -1.48
RFX7Q2KHR2 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.82□□□□□ -1.48
RFX7Q2KHR2 AC092905.1-201ENST00000467527 949 ntBASIC5.82□□□□□ -1.48
RFX7Q2KHR2 AC012123.2-201ENST00000485809 248 ntBASIC5.82□□□□□ -1.48
RFX7Q2KHR2 RN7SKP276-201ENST00000516242 268 ntBASIC5.82□□□□□ -1.48
RFX7Q2KHR2 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.82□□□□□ -1.48
RFX7Q2KHR2 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.82□□□□□ -1.48
RFX7Q2KHR2 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.82□□□□□ -1.48
RFX7Q2KHR2 AC138965.3-201ENST00000623875 498 ntBASIC5.82□□□□□ -1.48
RFX7Q2KHR2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.82□□□□□ -1.48
RFX7Q2KHR2 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFX7Q2KHR2 Z98755.1-201ENST00000407015 1384 ntBASIC5.82□□□□□ -1.48
RFX7Q2KHR2 TCP11X1-202ENST00000622971 1372 ntBASIC5.82□□□□□ -1.48
RFX7Q2KHR2 AP001157.1-201ENST00000550837 2339 ntBASIC5.82□□□□□ -1.48
RFX7Q2KHR2 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFX7Q2KHR2 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RFX7Q2KHR2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFX7Q2KHR2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RFX7Q2KHR2 AL672167.1-204ENST00000641875 3017 ntBASIC5.82□□□□□ -1.48
RFX7Q2KHR2 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.82□□□□□ -1.48
RFX7Q2KHR2 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 AL590240.1-201ENST00000334118 313 ntBASIC5.81□□□□□ -1.48
RFX7Q2KHR2 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 RPL7P57-201ENST00000423238 740 ntBASIC5.81□□□□□ -1.48
RFX7Q2KHR2 AC016712.1-201ENST00000431088 378 ntBASIC5.81□□□□□ -1.48
RFX7Q2KHR2 AL451139.1-201ENST00000434718 346 ntBASIC5.81□□□□□ -1.48
RFX7Q2KHR2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 RN7SL354P-201ENST00000469282 294 ntBASIC5.81□□□□□ -1.48
RFX7Q2KHR2 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 AC026782.2-201ENST00000510845 636 ntBASIC5.81□□□□□ -1.48
RFX7Q2KHR2 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 LSM1P2-201ENST00000604911 322 ntBASIC5.81□□□□□ -1.48
RFX7Q2KHR2 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 AC007497.1-201ENST00000610421 561 ntBASIC5.81□□□□□ -1.48
RFX7Q2KHR2 MIR6853-201ENST00000619642 74 ntBASIC5.81□□□□□ -1.48
RFX7Q2KHR2 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 DHX40P1-201ENST00000588725 1412 ntBASIC5.81□□□□□ -1.48
RFX7Q2KHR2 TET1P1-201ENST00000426627 2301 ntBASIC5.81□□□□□ -1.48
RFX7Q2KHR2 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFX7Q2KHR2 AL049697.2-201ENST00000403708 294 ntBASIC5.8□□□□□ -1.48
RFX7Q2KHR2 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.8□□□□□ -1.48
RFX7Q2KHR2 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.8□□□□□ -1.48
RFX7Q2KHR2 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.8□□□□□ -1.48
RFX7Q2KHR2 RPS27AP7-201ENST00000422792 455 ntBASIC5.8□□□□□ -1.48
RFX7Q2KHR2 OR2AH1P-201ENST00000425717 928 ntBASIC5.8□□□□□ -1.48
RFX7Q2KHR2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.8□□□□□ -1.48
RFX7Q2KHR2 RPS5P7-201ENST00000456664 608 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms