Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC104695.2-201ENST00000605056 775 ntBASIC3.96□□□□□ -1.78
SSBP1Q04837 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC3.96□□□□□ -1.78
SSBP1Q04837 AC109309.2-201ENST00000612597 332 ntBASIC3.96□□□□□ -1.78
SSBP1Q04837 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSBP1Q04837 AL158196.1-201ENST00000616786 434 ntBASIC3.96□□□□□ -1.78
SSBP1Q04837 AC074276.2-201ENST00000619891 348 ntBASIC3.96□□□□□ -1.78
SSBP1Q04837 MIR6813-201ENST00000621638 56 ntBASIC3.96□□□□□ -1.78
SSBP1Q04837 MIR4727-201ENST00000622232 55 ntBASIC3.96□□□□□ -1.78
SSBP1Q04837 AC073593.1-201ENST00000624500 411 ntBASIC3.96□□□□□ -1.78
SSBP1Q04837 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.96□□□□□ -1.78
SSBP1Q04837 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SSBP1Q04837 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSBP1Q04837 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SSBP1Q04837 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSBP1Q04837 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSBP1Q04837 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SSBP1Q04837 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSBP1Q04837 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSBP1Q04837 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
SSBP1Q04837 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.96□□□□□ -1.78
SSBP1Q04837 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSBP1Q04837 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.95□□□□□ -1.78
SSBP1Q04837 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.95□□□□□ -1.78
SSBP1Q04837 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.95□□□□□ -1.78
SSBP1Q04837 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SSBP1Q04837 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSBP1Q04837 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSBP1Q04837 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSBP1Q04837 MTCO1P22-201ENST00000604619 1360 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSBP1Q04837 AC067945.1-201ENST00000342609 618 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 RNU1-15P-201ENST00000353977 144 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 RN7SKP160-201ENST00000363804 340 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SSBP1Q04837 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.95□□□□□ -1.78
SSBP1Q04837 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SSBP1Q04837 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.95□□□□□ -1.78
SSBP1Q04837 AC002524.1-201ENST00000411687 547 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.95□□□□□ -1.78
SSBP1Q04837 AF186996.5-201ENST00000418098 904 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC3.95□□□□□ -1.78
SSBP1Q04837 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.95□□□□□ -1.78
SSBP1Q04837 AL137845.2-201ENST00000444292 988 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 AL161636.2-201ENST00000445179 927 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 RPS27AP2-201ENST00000457576 465 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 AC092905.1-201ENST00000467527 949 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 RN7SL319P-201ENST00000480656 221 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.95□□□□□ -1.78
SSBP1Q04837 RN7SL466P-201ENST00000497546 295 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.95□□□□□ -1.78
SSBP1Q04837 RN7SKP183-201ENST00000517169 324 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 AC112191.2-201ENST00000522428 333 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 AL049779.2-201ENST00000553847 315 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SSBP1Q04837 RN7SL802P-201ENST00000577858 299 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 MIR5699-201ENST00000578903 90 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 ARGFXP2-201ENST00000579304 949 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.95□□□□□ -1.78
SSBP1Q04837 AC011447.4-201ENST00000587562 111 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 BNIP3P32-201ENST00000600015 554 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 AL499605.1-201ENST00000604628 403 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 AL008729.2-201ENST00000606393 473 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 AP002360.3-201ENST00000607673 710 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 AC005840.5-201ENST00000619166 599 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SSBP1Q04837 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SSBP1Q04837 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.95□□□□□ -1.78
SSBP1Q04837 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.95□□□□□ -1.78
SSBP1Q04837 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.95□□□□□ -1.78
SSBP1Q04837 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSBP1Q04837 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.95□□□□□ -1.78
SSBP1Q04837 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSBP1Q04837 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
SSBP1Q04837 CR383656.5-201ENST00000547616 1340 ntBASIC3.95□□□□□ -1.78
SSBP1Q04837 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.94□□□□□ -1.78
SSBP1Q04837 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.94□□□□□ -1.78
SSBP1Q04837 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
SSBP1Q04837 MTND4P26-201ENST00000415971 1359 ntBASIC3.94□□□□□ -1.78
SSBP1Q04837 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.94□□□□□ -1.78
SSBP1Q04837 SNORD74.4-201ENST00000364129 80 ntBASIC3.94□□□□□ -1.78
SSBP1Q04837 RNA5SP132-201ENST00000364725 118 ntBASIC3.94□□□□□ -1.78
SSBP1Q04837 RNA5SP151-201ENST00000365632 117 ntBASIC3.94□□□□□ -1.78
SSBP1Q04837 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSBP1Q04837 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC3.94□□□□□ -1.78
SSBP1Q04837 RN7SKP59-201ENST00000410520 314 ntBASIC3.94□□□□□ -1.78
SSBP1Q04837 GTF2IP5-201ENST00000414608 731 ntBASIC3.94□□□□□ -1.78
SSBP1Q04837 AC004552.1-201ENST00000419089 348 ntBASIC3.94□□□□□ -1.78
SSBP1Q04837 ATP5A1P8-201ENST00000423669 1291 ntBASIC3.94□□□□□ -1.78
SSBP1Q04837 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC3.94□□□□□ -1.78
SSBP1Q04837 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.94□□□□□ -1.78
SSBP1Q04837 CLNS1AP1-201ENST00000435954 682 ntBASIC3.94□□□□□ -1.78
SSBP1Q04837 AL138899.2-201ENST00000439139 499 ntBASIC3.94□□□□□ -1.78
SSBP1Q04837 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.94□□□□□ -1.78
SSBP1Q04837 AL163193.1-201ENST00000444895 788 ntBASIC3.94□□□□□ -1.78
SSBP1Q04837 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC3.94□□□□□ -1.78
SSBP1Q04837 SLC25A18P1-201ENST00000449385 454 ntBASIC3.94□□□□□ -1.78
SSBP1Q04837 RPS26P3-201ENST00000470205 348 ntBASIC3.94□□□□□ -1.78
SSBP1Q04837 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.94□□□□□ -1.78
SSBP1Q04837 AC090543.2-201ENST00000483963 348 ntBASIC3.94□□□□□ -1.78
SSBP1Q04837 AC004057.1-201ENST00000485827 348 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms