Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC2.84□□□□□ -1.96
HSPG2P98160 AC017019.1-201ENST00000426129 261 ntBASIC2.84□□□□□ -1.96
HSPG2P98160 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC2.84□□□□□ -1.96
HSPG2P98160 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.84□□□□□ -1.96
HSPG2P98160 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC2.84□□□□□ -1.96
HSPG2P98160 AL352984.2-202ENST00000613699 155 ntBASIC2.84□□□□□ -1.96
HSPG2P98160 AP003497.2-201ENST00000624220 967 ntBASIC2.84□□□□□ -1.96
HSPG2P98160 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC2.84□□□□□ -1.96
HSPG2P98160 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
HSPG2P98160 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
HSPG2P98160 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
HSPG2P98160 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
HSPG2P98160 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
HSPG2P98160 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC2.84□□□□□ -1.96
HSPG2P98160 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
HSPG2P98160 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC2.84□□□□□ -1.96
HSPG2P98160 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
HSPG2P98160 MT-RNR1-201ENST00000389680 954 ntBASIC2.84□□□□□ -1.96
HSPG2P98160 TBCAP2-201ENST00000416175 326 ntBASIC2.84□□□□□ -1.96
HSPG2P98160 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.84□□□□□ -1.96
HSPG2P98160 BTF3P10-201ENST00000433415 495 ntBASIC2.84□□□□□ -1.96
HSPG2P98160 ABCF2P2-201ENST00000450549 296 ntBASIC2.84□□□□□ -1.96
HSPG2P98160 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
HSPG2P98160 DYNLL1P4-201ENST00000549314 266 ntBASIC2.84□□□□□ -1.96
HSPG2P98160 AC090515.3-201ENST00000560431 315 ntBASIC2.84□□□□□ -1.96
HSPG2P98160 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.84□□□□□ -1.96
HSPG2P98160 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC2.84□□□□□ -1.96
HSPG2P98160 AC012314.7-201ENST00000619693 93 ntBASIC2.84□□□□□ -1.96
HSPG2P98160 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
HSPG2P98160 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
HSPG2P98160 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
HSPG2P98160 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
HSPG2P98160 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
HSPG2P98160 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC2.83□□□□□ -1.96
HSPG2P98160 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC2.83□□□□□ -1.96
HSPG2P98160 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC2.83□□□□□ -1.96
HSPG2P98160 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.83□□□□□ -1.96
HSPG2P98160 TBCA-203ENST00000517679 545 ntTSL 3 BASIC2.83□□□□□ -1.96
HSPG2P98160 OR7E10P-201ENST00000526420 991 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC2.83□□□□□ -1.96
HSPG2P98160 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC2.83□□□□□ -1.96
HSPG2P98160 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.83□□□□□ -1.96
HSPG2P98160 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HSPG2P98160 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC2.83□□□□□ -1.96
HSPG2P98160 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC2.83□□□□□ -1.96
HSPG2P98160 FAM27D1-201ENST00000612308 341 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 AC005899.7-201ENST00000618199 588 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 MIR7975-201ENST00000619350 68 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HSPG2P98160 CR392039.5-201ENST00000623201 510 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC2.83□□□□□ -1.96
HSPG2P98160 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC2.83□□□□□ -1.96
HSPG2P98160 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HSPG2P98160 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC2.83□□□□□ -1.96
HSPG2P98160 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
HSPG2P98160 OR51H2P-202ENST00000641424 3046 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.83□□□□□ -1.96
HSPG2P98160 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC2.83□□□□□ -1.96
HSPG2P98160 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HSPG2P98160 PRELID3BP6-201ENST00000503839 571 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.83□□□□□ -1.96
HSPG2P98160 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HSPG2P98160 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC2.83□□□□□ -1.96
HSPG2P98160 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC2.83□□□□□ -1.96
HSPG2P98160 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC2.83□□□□□ -1.96
HSPG2P98160 OR2L1P-202ENST00000641567 1023 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HSPG2P98160 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
HSPG2P98160 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
HSPG2P98160 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
HSPG2P98160 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC2.83□□□□□ -1.96
HSPG2P98160 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC2.83□□□□□ -1.96
HSPG2P98160 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HSPG2P98160 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC2.83□□□□□ -1.96
HSPG2P98160 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC2.83□□□□□ -1.96
HSPG2P98160 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.83□□□□□ -1.96
HSPG2P98160 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
HSPG2P98160 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HSPG2P98160 AL121950.1-201ENST00000624993 2077 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HSPG2P98160 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HSPG2P98160 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC2.83□□□□□ -1.96
HSPG2P98160 RN7SKP159-201ENST00000410657 292 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.83□□□□□ -1.96
HSPG2P98160 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC2.83□□□□□ -1.96
HSPG2P98160 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC2.83□□□□□ -1.96
HSPG2P98160 BX842559.2-201ENST00000451418 605 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 RN7SL132P-201ENST00000478131 296 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 AC005412.2-201ENST00000492004 341 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 AC096553.1-201ENST00000605169 829 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 AC006042.3-201ENST00000454684 1469 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 AC093829.1-201ENST00000506662 1618 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 AL391684.1-202ENST00000641293 1636 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
HSPG2P98160 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC2.83□□□□□ -1.96
HSPG2P98160 FAM91A3P-201ENST00000456826 2544 ntBASIC2.83□□□□□ -1.96
HSPG2P98160 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HSPG2P98160 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
HSPG2P98160 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms