Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.56□□□□□ -1.84
CKS1BP61024 AC009237.13-201ENST00000603193 276 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 ELOCP34-201ENST00000604436 327 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AC009597.2-201ENST00000604659 592 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.56□□□□□ -1.84
CKS1BP61024 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC3.56□□□□□ -1.84
CKS1BP61024 BX005214.3-202ENST00000619809 325 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AL669942.2-201ENST00000620352 697 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 MIR6839-201ENST00000620425 113 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 MIR6813-201ENST00000621638 56 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 MIR6806-201ENST00000622141 64 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AC135068.5-201ENST00000624197 983 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.56□□□□□ -1.84
CKS1BP61024 AC008691.1-209ENST00000642094 814 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CKS1BP61024 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.56□□□□□ -1.84
CKS1BP61024 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CKS1BP61024 SRRM1P3-201ENST00000426911 2678 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.56□□□□□ -1.84
CKS1BP61024 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC3.55□□□□□ -1.84
CKS1BP61024 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC3.55□□□□□ -1.84
CKS1BP61024 AL136964.1-201ENST00000622038 2990 ntBASIC3.55□□□□□ -1.84
CKS1BP61024 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CKS1BP61024 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CKS1BP61024 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CKS1BP61024 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CKS1BP61024 IFIT1P1-201ENST00000400497 1449 ntBASIC3.55□□□□□ -1.84
CKS1BP61024 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
CKS1BP61024 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.55□□□□□ -1.84
CKS1BP61024 SSXP3-201ENST00000442971 1300 ntBASIC3.55□□□□□ -1.84
CKS1BP61024 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC3.55□□□□□ -1.84
CKS1BP61024 ODF3-202ENST00000342593 386 ntTSL 5 BASIC3.55□□□□□ -1.84
CKS1BP61024 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CKS1BP61024 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.55□□□□□ -1.84
CKS1BP61024 AC013429.2-201ENST00000418798 781 ntBASIC3.55□□□□□ -1.84
CKS1BP61024 PDSS1P1-201ENST00000422953 1114 ntBASIC3.55□□□□□ -1.84
CKS1BP61024 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CKS1BP61024 AL133173.1-201ENST00000423458 397 ntBASIC3.55□□□□□ -1.84
CKS1BP61024 GSTM5P1-201ENST00000434751 660 ntBASIC3.55□□□□□ -1.84
CKS1BP61024 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.55□□□□□ -1.84
CKS1BP61024 AL353748.1-201ENST00000440753 474 ntBASIC3.55□□□□□ -1.84
CKS1BP61024 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.55□□□□□ -1.84
CKS1BP61024 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC3.55□□□□□ -1.84
CKS1BP61024 LDHBP2-201ENST00000456969 1005 ntBASIC3.55□□□□□ -1.84
CKS1BP61024 AC079168.1-201ENST00000458741 345 ntBASIC3.55□□□□□ -1.84
CKS1BP61024 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC3.55□□□□□ -1.84
CKS1BP61024 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC3.55□□□□□ -1.84
CKS1BP61024 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC3.55□□□□□ -1.84
CKS1BP61024 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.55□□□□□ -1.84
CKS1BP61024 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC3.55□□□□□ -1.84
CKS1BP61024 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.55□□□□□ -1.84
CKS1BP61024 TOMM20P2-201ENST00000540082 421 ntBASIC3.55□□□□□ -1.84
CKS1BP61024 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.55□□□□□ -1.84
CKS1BP61024 RPL21P7-201ENST00000557463 483 ntBASIC3.55□□□□□ -1.84
CKS1BP61024 AC026826.3-201ENST00000561747 158 ntBASIC3.55□□□□□ -1.84
CKS1BP61024 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC3.55□□□□□ -1.84
CKS1BP61024 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.55□□□□□ -1.84
CKS1BP61024 AC012616.1-201ENST00000600294 197 ntBASIC3.55□□□□□ -1.84
CKS1BP61024 AC110741.2-201ENST00000605278 268 ntBASIC3.55□□□□□ -1.84
CKS1BP61024 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC3.55□□□□□ -1.84
CKS1BP61024 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.55□□□□□ -1.84
CKS1BP61024 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC3.55□□□□□ -1.84
CKS1BP61024 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CKS1BP61024 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CKS1BP61024 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.55□□□□□ -1.84
CKS1BP61024 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CKS1BP61024 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CKS1BP61024 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CKS1BP61024 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CKS1BP61024 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.54□□□□□ -1.84
CKS1BP61024 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CKS1BP61024 SLC9B1P1-201ENST00000331172 1337 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
CKS1BP61024 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CKS1BP61024 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.54□□□□□ -1.84
CKS1BP61024 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CKS1BP61024 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CKS1BP61024 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.54□□□□□ -1.84
CKS1BP61024 DBIP1-201ENST00000401435 260 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 HMGB1P20-201ENST00000402555 677 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 MIR1275-201ENST00000408770 80 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 AMD1P2-201ENST00000412936 992 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC3.54□□□□□ -1.84
CKS1BP61024 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC3.54□□□□□ -1.84
CKS1BP61024 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC3.54□□□□□ -1.84
CKS1BP61024 NANOGP6-201ENST00000429190 847 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 AL354893.1-201ENST00000433735 348 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 ZDHHC20P1-204ENST00000435787 423 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 AL512637.1-201ENST00000439523 1231 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC3.54□□□□□ -1.84
CKS1BP61024 SLC25A18P1-201ENST00000449385 454 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 AC068491.1-201ENST00000449539 1241 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 AP006222.1-205ENST00000450734 457 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC3.54□□□□□ -1.84
CKS1BP61024 HMGB1P4-201ENST00000455362 567 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 AC091180.1-201ENST00000462104 372 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 AC037198.2-201ENST00000478845 733 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 RPL7P41-201ENST00000485823 957 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 HMGB1P44-201ENST00000508597 572 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 RNU6-943P-201ENST00000516960 98 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms