Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.55□□□□□ -1.52
HDAC4P56524 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.55□□□□□ -1.52
HDAC4P56524 AC084759.1-201ENST00000561168 290 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 RN7SL290P-201ENST00000578661 300 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.55□□□□□ -1.52
HDAC4P56524 AL096803.3-201ENST00000609032 532 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 AC136428.4-201ENST00000634254 1155 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.55□□□□□ -1.52
HDAC4P56524 OR5AC4P-202ENST00000642086 985 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HDAC4P56524 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HDAC4P56524 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HDAC4P56524 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.55□□□□□ -1.52
HDAC4P56524 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
HDAC4P56524 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HDAC4P56524 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.55□□□□□ -1.52
HDAC4P56524 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HDAC4P56524 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HDAC4P56524 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HDAC4P56524 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
HDAC4P56524 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HDAC4P56524 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HDAC4P56524 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.54□□□□□ -1.52
HDAC4P56524 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HDAC4P56524 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.54□□□□□ -1.52
HDAC4P56524 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.54□□□□□ -1.52
HDAC4P56524 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HDAC4P56524 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HDAC4P56524 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.54□□□□□ -1.52
HDAC4P56524 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HDAC4P56524 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.54□□□□□ -1.52
HDAC4P56524 RNA5SP183-201ENST00000362452 119 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 RN7SKP160-201ENST00000363804 340 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 RNU4-7P-201ENST00000364758 141 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 GSTA12P-201ENST00000402398 508 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.54□□□□□ -1.52
HDAC4P56524 AL133325.1-201ENST00000421090 382 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 HSPD1P12-201ENST00000429127 1069 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 RPL19P16-201ENST00000433839 588 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 AL627308.1-201ENST00000435693 821 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.54□□□□□ -1.52
HDAC4P56524 NOP56P2-201ENST00000447491 769 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.54□□□□□ -1.52
HDAC4P56524 RPS26P39-201ENST00000469206 341 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 AC108729.2-201ENST00000476543 840 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 AC092902.1-201ENST00000486999 259 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 RPS12P31-201ENST00000491419 398 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 RPL23AP73-201ENST00000492507 471 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.54□□□□□ -1.52
HDAC4P56524 AC093763.2-201ENST00000505334 1223 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.54□□□□□ -1.52
HDAC4P56524 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.54□□□□□ -1.52
HDAC4P56524 RNU6-1102P-201ENST00000516149 96 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.54□□□□□ -1.52
HDAC4P56524 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.54□□□□□ -1.52
HDAC4P56524 AP003102.1-201ENST00000525638 661 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.54□□□□□ -1.52
HDAC4P56524 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.54□□□□□ -1.52
HDAC4P56524 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.54□□□□□ -1.52
HDAC4P56524 AL390726.5-202ENST00000564800 256 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 MIR4675-201ENST00000577898 77 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 AC233702.9-201ENST00000581528 203 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 DNAJC19P3-201ENST00000594491 331 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.54□□□□□ -1.52
HDAC4P56524 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.54□□□□□ -1.52
HDAC4P56524 AC135178.6-201ENST00000605314 398 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 AC242628.1-201ENST00000606810 391 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HDAC4P56524 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HDAC4P56524 AL163051.2-201ENST00000618976 735 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 AC092159.4-201ENST00000624944 550 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.54□□□□□ -1.52
HDAC4P56524 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HDAC4P56524 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HDAC4P56524 THAP12P5-201ENST00000405864 2275 ntBASIC5.54□□□□□ -1.52
HDAC4P56524 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HDAC4P56524 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
HDAC4P56524 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HDAC4P56524 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HDAC4P56524 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.54□□□□□ -1.52
HDAC4P56524 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC4P56524 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC4P56524 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.53□□□□□ -1.52
HDAC4P56524 AC083843.3-201ENST00000623679 2186 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC4P56524 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC4P56524 AL022322.2-201ENST00000624072 20397 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 OR55B1P-203ENST00000641518 2602 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 Z95331.1-201ENST00000623075 23112 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
HDAC4P56524 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC4P56524 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HDAC4P56524 OR9G4-201ENST00000302957 984 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 RNU1-19P-201ENST00000363306 165 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 BMS1P3-201ENST00000372011 932 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 Z86062.1-201ENST00000406773 777 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC4P56524 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms