Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC5.87□□□□□ -1.47
GFRA1P56159 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.87□□□□□ -1.47
GFRA1P56159 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC5.87□□□□□ -1.47
GFRA1P56159 AC127070.3-201ENST00000503695 3263 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.87□□□□□ -1.47
GFRA1P56159 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.86□□□□□ -1.47
GFRA1P56159 AC110597.1-201ENST00000562669 3176 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 AL121768.1-201ENST00000613917 2544 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.86□□□□□ -1.47
GFRA1P56159 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
GFRA1P56159 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.86□□□□□ -1.47
GFRA1P56159 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.86□□□□□ -1.47
GFRA1P56159 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5.86□□□□□ -1.47
GFRA1P56159 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
GFRA1P56159 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
GFRA1P56159 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 RNU1-24P-201ENST00000364285 165 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 RNA5SP485-201ENST00000365053 119 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.86□□□□□ -1.47
GFRA1P56159 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
GFRA1P56159 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 RNU2-6P-201ENST00000411404 190 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 RPL17P12-201ENST00000413391 526 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.86□□□□□ -1.47
GFRA1P56159 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.86□□□□□ -1.47
GFRA1P56159 FNDC3CP-201ENST00000420795 1155 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AC104651.1-201ENST00000427559 735 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AC003989.1-201ENST00000434569 565 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 MTND1P28-201ENST00000435623 950 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.86□□□□□ -1.47
GFRA1P56159 MTATP6P23-201ENST00000440153 476 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.86□□□□□ -1.47
GFRA1P56159 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.86□□□□□ -1.47
GFRA1P56159 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.86□□□□□ -1.47
GFRA1P56159 NDUFA5P7-201ENST00000452914 242 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AL133244.1-201ENST00000456007 258 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.86□□□□□ -1.47
GFRA1P56159 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.86□□□□□ -1.47
GFRA1P56159 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.86□□□□□ -1.47
GFRA1P56159 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
GFRA1P56159 GTF2F2P1-201ENST00000511083 675 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 SUMO2P7-201ENST00000511179 285 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AC093816.1-201ENST00000515076 913 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 SNORA74.1-201ENST00000516320 180 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 RN7SKP183-201ENST00000517169 324 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AC027309.2-201ENST00000520566 192 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AC087276.1-201ENST00000529659 480 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 OR4A43P-201ENST00000532938 908 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 CCNG2P1-201ENST00000549521 1000 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AC121758.1-202ENST00000556917 658 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AC023968.1-201ENST00000560719 475 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.86□□□□□ -1.47
GFRA1P56159 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.86□□□□□ -1.47
GFRA1P56159 AP001004.1-201ENST00000582468 324 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AC083760.1-201ENST00000589621 670 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.86□□□□□ -1.47
GFRA1P56159 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.86□□□□□ -1.47
GFRA1P56159 AL953862.2-201ENST00000603089 820 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AC091488.1-201ENST00000604239 660 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AL513477.2-201ENST00000607858 568 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AP001596.2-201ENST00000608410 312 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AL359091.2-201ENST00000609303 556 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.86□□□□□ -1.47
GFRA1P56159 MIR6780B-201ENST00000610307 79 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AL589743.7-201ENST00000612637 233 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AC013476.2-201ENST00000614456 459 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AL445647.2-201ENST00000615170 130 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 MIR6085-201ENST00000618314 110 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.86□□□□□ -1.47
GFRA1P56159 SEPT14P19-203ENST00000633205 211 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.86□□□□□ -1.47
GFRA1P56159 LINC02495-203ENST00000636704 242 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC5.86□□□□□ -1.47
GFRA1P56159 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
GFRA1P56159 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA1P56159 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.86□□□□□ -1.47
GFRA1P56159 MAPK10-344ENST00000641718 3746 ntBASIC5.86□□□□□ -1.47
GFRA1P56159 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.86□□□□□ -1.47
GFRA1P56159 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms