Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH6P55285 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH6P55285 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH6P55285 AC104260.2-201ENST00000623551 3497 ntBASIC5.07□□□□□ -1.6
CDH6P55285 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH6P55285 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH6P55285 RN7SKP74-201ENST00000362849 309 ntBASIC5.07□□□□□ -1.6
CDH6P55285 RNU4-4P-201ENST00000364588 130 ntBASIC5.07□□□□□ -1.6
CDH6P55285 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CDH6P55285 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH6P55285 AC233289.1-201ENST00000403700 508 ntBASIC5.07□□□□□ -1.6
CDH6P55285 AP002530.1-201ENST00000405705 684 ntBASIC5.07□□□□□ -1.6
CDH6P55285 SPTLC1P2-201ENST00000407089 121 ntBASIC5.07□□□□□ -1.6
CDH6P55285 DPPA2P3-201ENST00000411853 655 ntBASIC5.07□□□□□ -1.6
CDH6P55285 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDH6P55285 RGS17P1-201ENST00000423358 553 ntBASIC5.07□□□□□ -1.6
CDH6P55285 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH6P55285 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH6P55285 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH6P55285 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH6P55285 AL591363.1-201ENST00000450091 483 ntBASIC5.07□□□□□ -1.6
CDH6P55285 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH6P55285 AC110749.1-201ENST00000462007 357 ntBASIC5.07□□□□□ -1.6
CDH6P55285 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH6P55285 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH6P55285 RPL7AP10-201ENST00000481016 791 ntBASIC5.07□□□□□ -1.6
CDH6P55285 AC090142.2-201ENST00000483263 416 ntBASIC5.07□□□□□ -1.6
CDH6P55285 AC069304.1-201ENST00000491593 704 ntBASIC5.07□□□□□ -1.6
CDH6P55285 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH6P55285 AC140172.1-201ENST00000502928 141 ntBASIC5.07□□□□□ -1.6
CDH6P55285 AC008638.1-201ENST00000506035 866 ntBASIC5.07□□□□□ -1.6
CDH6P55285 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH6P55285 RNU6-513P-201ENST00000516104 104 ntBASIC5.07□□□□□ -1.6
CDH6P55285 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH6P55285 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH6P55285 AC025423.2-201ENST00000537570 439 ntBASIC5.07□□□□□ -1.6
CDH6P55285 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.07□□□□□ -1.6
CDH6P55285 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH6P55285 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH6P55285 AL022401.1-201ENST00000619498 108 ntBASIC5.07□□□□□ -1.6
CDH6P55285 AC012414.7-202ENST00000622705 1090 ntBASIC5.07□□□□□ -1.6
CDH6P55285 AL353662.3-201ENST00000625131 237 ntBASIC5.07□□□□□ -1.6
CDH6P55285 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH6P55285 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH6P55285 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH6P55285 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH6P55285 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH6P55285 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CDH6P55285 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH6P55285 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH6P55285 AC027228.2-201ENST00000567141 2154 ntBASIC5.06□□□□□ -1.6
CDH6P55285 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDH6P55285 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH6P55285 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CDH6P55285 SNORA70-201ENST00000384436 135 ntBASIC5.06□□□□□ -1.6
CDH6P55285 MIR105-2-201ENST00000385083 81 ntBASIC5.06□□□□□ -1.6
CDH6P55285 RPL37AP8-201ENST00000494116 276 ntBASIC5.06□□□□□ -1.6
CDH6P55285 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH6P55285 RNA5SP392-201ENST00000516905 112 ntBASIC5.06□□□□□ -1.6
CDH6P55285 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH6P55285 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.06□□□□□ -1.6
CDH6P55285 EIF4EP5-201ENST00000528228 640 ntBASIC5.06□□□□□ -1.6
CDH6P55285 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH6P55285 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH6P55285 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH6P55285 AL049839.1-201ENST00000556151 657 ntBASIC5.06□□□□□ -1.6
CDH6P55285 SNORA74C-1-201ENST00000580726 201 ntBASIC5.06□□□□□ -1.6
CDH6P55285 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH6P55285 AF117829.2-201ENST00000619538 361 ntBASIC5.06□□□□□ -1.6
CDH6P55285 AC018445.2-201ENST00000622987 260 ntBASIC5.06□□□□□ -1.6
CDH6P55285 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH6P55285 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
CDH6P55285 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH6P55285 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDH6P55285 AC099654.2-201ENST00000433031 1980 ntBASIC5.05□□□□□ -1.6
CDH6P55285 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH6P55285 AC025574.1-201ENST00000554784 1653 ntBASIC5.05□□□□□ -1.6
CDH6P55285 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH6P55285 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH6P55285 STX3-208ENST00000641815 3236 ntBASIC5.05□□□□□ -1.6
CDH6P55285 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH6P55285 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
CDH6P55285 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.05□□□□□ -1.6
CDH6P55285 BMS1P3-201ENST00000372011 932 ntBASIC5.05□□□□□ -1.6
CDH6P55285 RNA5SP345-201ENST00000410646 108 ntBASIC5.05□□□□□ -1.6
CDH6P55285 GTF2IP5-201ENST00000414608 731 ntBASIC5.05□□□□□ -1.6
CDH6P55285 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH6P55285 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH6P55285 EIF4HP2-201ENST00000424380 563 ntBASIC5.05□□□□□ -1.6
CDH6P55285 CKS1BP6-201ENST00000424932 240 ntBASIC5.05□□□□□ -1.6
CDH6P55285 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH6P55285 RPL7P11-201ENST00000437586 658 ntBASIC5.05□□□□□ -1.6
CDH6P55285 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH6P55285 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.05□□□□□ -1.6
CDH6P55285 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH6P55285 RHEBP2-201ENST00000450289 600 ntBASIC5.05□□□□□ -1.6
CDH6P55285 RN7SL515P-201ENST00000463999 297 ntBASIC5.05□□□□□ -1.6
CDH6P55285 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH6P55285 RPL7AP6-201ENST00000477943 801 ntBASIC5.05□□□□□ -1.6
CDH6P55285 RN7SL214P-201ENST00000487317 265 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms