Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.81□□□□□ -1.48
NUP98P52948 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.81□□□□□ -1.48
NUP98P52948 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.81□□□□□ -1.48
NUP98P52948 AC018628.1-201ENST00000624147 3819 ntBASIC5.81□□□□□ -1.48
NUP98P52948 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUP98P52948 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.8□□□□□ -1.48
NUP98P52948 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
NUP98P52948 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.8□□□□□ -1.48
NUP98P52948 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NUP98P52948 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.8□□□□□ -1.48
NUP98P52948 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUP98P52948 AL445487.1-201ENST00000415694 1580 ntBASIC5.8□□□□□ -1.48
NUP98P52948 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
NUP98P52948 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.8□□□□□ -1.48
NUP98P52948 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NUP98P52948 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NUP98P52948 AL583835.1-201ENST00000399570 407 ntBASIC5.8□□□□□ -1.48
NUP98P52948 FTH1P16-201ENST00000435241 552 ntBASIC5.8□□□□□ -1.48
NUP98P52948 RPL7P32-201ENST00000457119 744 ntBASIC5.8□□□□□ -1.48
NUP98P52948 AC090142.1-201ENST00000465776 462 ntBASIC5.8□□□□□ -1.48
NUP98P52948 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.8□□□□□ -1.48
NUP98P52948 AP001160.4-201ENST00000596971 382 ntBASIC5.8□□□□□ -1.48
NUP98P52948 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.8□□□□□ -1.48
NUP98P52948 MIR6716-201ENST00000613413 80 ntBASIC5.8□□□□□ -1.48
NUP98P52948 AL049536.1-201ENST00000625043 744 ntBASIC5.8□□□□□ -1.48
NUP98P52948 ICE2P1-201ENST00000512800 1849 ntBASIC5.8□□□□□ -1.48
NUP98P52948 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.79□□□□□ -1.48
NUP98P52948 AL391684.1-202ENST00000641293 1636 ntBASIC5.79□□□□□ -1.48
NUP98P52948 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUP98P52948 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUP98P52948 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUP98P52948 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.79□□□□□ -1.48
NUP98P52948 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NUP98P52948 EIF4HP2-201ENST00000424380 563 ntBASIC5.79□□□□□ -1.48
NUP98P52948 NFYAP1-201ENST00000431953 972 ntBASIC5.79□□□□□ -1.48
NUP98P52948 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.79□□□□□ -1.48
NUP98P52948 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.79□□□□□ -1.48
NUP98P52948 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.79□□□□□ -1.48
NUP98P52948 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP98P52948 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NUP98P52948 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NUP98P52948 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.79□□□□□ -1.48
NUP98P52948 RNA5SP439-201ENST00000617595 124 ntBASIC5.79□□□□□ -1.48
NUP98P52948 AC009120.7-201ENST00000623452 780 ntBASIC5.79□□□□□ -1.48
NUP98P52948 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUP98P52948 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NUP98P52948 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
NUP98P52948 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUP98P52948 AC022417.1-201ENST00000624768 1303 ntBASIC5.79□□□□□ -1.48
NUP98P52948 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUP98P52948 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.79□□□□□ -1.48
NUP98P52948 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NUP98P52948 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
NUP98P52948 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUP98P52948 AC008549.2-201ENST00000333482 706 ntBASIC5.78□□□□□ -1.48
NUP98P52948 RNA5SP28-201ENST00000363841 119 ntBASIC5.78□□□□□ -1.48
NUP98P52948 AC011933.1-201ENST00000413334 321 ntBASIC5.78□□□□□ -1.48
NUP98P52948 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP98P52948 RAD23BP1-201ENST00000421404 1227 ntBASIC5.78□□□□□ -1.48
NUP98P52948 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP98P52948 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP98P52948 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP98P52948 AC116533.1-201ENST00000459748 321 ntBASIC5.78□□□□□ -1.48
NUP98P52948 AC097486.1-201ENST00000515331 210 ntBASIC5.78□□□□□ -1.48
NUP98P52948 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP98P52948 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.78□□□□□ -1.48
NUP98P52948 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
NUP98P52948 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.78□□□□□ -1.48
NUP98P52948 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUP98P52948 AC108751.5-201ENST00000492880 1336 ntBASIC5.78□□□□□ -1.48
NUP98P52948 SAMMSON-210ENST00000641260 1308 ntBASIC5.78□□□□□ -1.48
NUP98P52948 AL137141.1-201ENST00000624622 4836 ntBASIC5.78□□□□□ -1.48
NUP98P52948 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP98P52948 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NUP98P52948 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NUP98P52948 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.78□□□□□ -1.48
NUP98P52948 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP98P52948 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUP98P52948 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NUP98P52948 AC104333.2-201ENST00000422630 192 ntBASIC5.78□□□□□ -1.48
NUP98P52948 RPS27AP12-201ENST00000429552 465 ntBASIC5.78□□□□□ -1.48
NUP98P52948 RPS29P17-201ENST00000430795 166 ntBASIC5.78□□□□□ -1.48
NUP98P52948 AL162591.2-201ENST00000449634 317 ntBASIC5.78□□□□□ -1.48
NUP98P52948 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP98P52948 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.78□□□□□ -1.48
NUP98P52948 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP98P52948 AL109766.1-201ENST00000555080 552 ntBASIC5.78□□□□□ -1.48
NUP98P52948 AL139041.1-201ENST00000605480 610 ntBASIC5.78□□□□□ -1.48
NUP98P52948 AL133243.1-201ENST00000614487 366 ntBASIC5.78□□□□□ -1.48
NUP98P52948 AC010480.1-201ENST00000624823 684 ntBASIC5.78□□□□□ -1.48
NUP98P52948 AP000756.2-201ENST00000624168 2567 ntBASIC5.78□□□□□ -1.48
NUP98P52948 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUP98P52948 CASC19-206ENST00000641028 1430 ntBASIC5.78□□□□□ -1.48
NUP98P52948 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUP98P52948 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.78□□□□□ -1.48
NUP98P52948 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.77□□□□□ -1.48
NUP98P52948 AC140134.1-201ENST00000511830 3544 ntBASIC5.77□□□□□ -1.49
NUP98P52948 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP98P52948 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP98P52948 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms