Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN9P43378 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN9P43378 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN9P43378 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN9P43378 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
PTPN9P43378 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN9P43378 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN9P43378 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN9P43378 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN9P43378 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN9P43378 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN9P43378 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN9P43378 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
PTPN9P43378 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN9P43378 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN9P43378 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN9P43378 U3.2-201ENST00000362981 210 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 RN7SKP269-201ENST00000365545 319 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN9P43378 OR8V1P-201ENST00000395193 873 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 MTCYBP7-201ENST00000419540 1134 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 MTND4LP13-201ENST00000425022 298 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN9P43378 BX119904.1-201ENST00000432026 348 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 FTLP19-201ENST00000433300 394 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 PPIAP20-201ENST00000449839 135 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 TVP23BP2-201ENST00000455082 615 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN9P43378 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN9P43378 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN9P43378 RPL7P39-201ENST00000481157 744 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 SYT14P1-201ENST00000481459 721 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 AC024558.1-201ENST00000505008 528 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN9P43378 TPT1P8-201ENST00000510120 555 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN9P43378 AC012400.1-201ENST00000518452 381 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 AP003355.1-201ENST00000518956 587 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN9P43378 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN9P43378 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN9P43378 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN9P43378 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN9P43378 AC093591.2-201ENST00000565254 3843 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN9P43378 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN9P43378 OR1AB1P-201ENST00000585564 761 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN9P43378 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPN9P43378 AP000864.1-201ENST00000609424 650 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 AL355816.2-201ENST00000610049 647 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 OR8G7P-201ENST00000616658 848 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 AC118658.2-201ENST00000618697 459 ntBASIC5.47□□□□□ -1.53
PTPN9P43378 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN9P43378 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN9P43378 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN9P43378 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN9P43378 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN9P43378 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPN9P43378 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN9P43378 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTPN9P43378 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PTPN9P43378 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PTPN9P43378 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPN9P43378 CDC27P2-201ENST00000425026 1922 ntBASIC5.46□□□□□ -1.53
PTPN9P43378 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PTPN9P43378 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PTPN9P43378 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
PTPN9P43378 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTPN9P43378 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTPN9P43378 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTPN9P43378 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PTPN9P43378 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
PTPN9P43378 RNA5SP90-201ENST00000364801 99 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 RNA5SP187-201ENST00000384400 119 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 AL391361.1-201ENST00000405580 489 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
PTPN9P43378 RNU4-27P-201ENST00000410889 139 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 RPL12P9-201ENST00000412942 488 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 COX5BP7-201ENST00000414780 274 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 SLC35E1P1-201ENST00000419313 864 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 AC079355.1-201ENST00000421770 223 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.46□□□□□ -1.54
PTPN9P43378 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.46□□□□□ -1.54
PTPN9P43378 AL353898.1-201ENST00000444055 238 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.46□□□□□ -1.54
PTPN9P43378 BX842559.2-201ENST00000451418 605 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 PRPF38AP1-201ENST00000451976 933 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 MTATP6P14-201ENST00000455189 673 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 Z92846.1-201ENST00000456203 268 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 RPS21P4-201ENST00000487122 248 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 RPL7L1P4-201ENST00000513004 707 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
PTPN9P43378 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.46□□□□□ -1.54
PTPN9P43378 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.46□□□□□ -1.54
PTPN9P43378 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.46□□□□□ -1.54
PTPN9P43378 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PTPN9P43378 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.46□□□□□ -1.54
PTPN9P43378 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms