Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL18A1P39060 RPL23AP26-201ENST00000412728 464 ntBASIC6.11□□□□□ -1.43
COL18A1P39060 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.11□□□□□ -1.43
COL18A1P39060 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL18A1P39060 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC6.11□□□□□ -1.43
COL18A1P39060 AC053481.1-201ENST00000467217 306 ntBASIC6.11□□□□□ -1.43
COL18A1P39060 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.11□□□□□ -1.43
COL18A1P39060 ZYXP1-201ENST00000617638 118 ntBASIC6.11□□□□□ -1.43
COL18A1P39060 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL18A1P39060 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
COL18A1P39060 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.11□□□□□ -1.43
COL18A1P39060 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL18A1P39060 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL18A1P39060 Z95114.1-201ENST00000624264 14574 ntBASIC6.11□□□□□ -1.43
COL18A1P39060 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL18A1P39060 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL18A1P39060 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL18A1P39060 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL18A1P39060 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.11□□□□□ -1.43
COL18A1P39060 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL18A1P39060 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
COL18A1P39060 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL18A1P39060 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL18A1P39060 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.11□□□□□ -1.43
COL18A1P39060 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL18A1P39060 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL18A1P39060 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL18A1P39060 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6.11□□□□□ -1.43
COL18A1P39060 RPL36AP36-201ENST00000418616 301 ntBASIC6.11□□□□□ -1.43
COL18A1P39060 AL139095.3-201ENST00000419672 1203 ntBASIC6.11□□□□□ -1.43
COL18A1P39060 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.11□□□□□ -1.43
COL18A1P39060 RPS12P10-201ENST00000427031 377 ntBASIC6.11□□□□□ -1.43
COL18A1P39060 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL18A1P39060 RN7SL303P-201ENST00000469773 251 ntBASIC6.11□□□□□ -1.43
COL18A1P39060 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.11□□□□□ -1.43
COL18A1P39060 AC105137.1-201ENST00000484355 562 ntBASIC6.11□□□□□ -1.43
COL18A1P39060 CR383656.1-201ENST00000484916 377 ntBASIC6.11□□□□□ -1.43
COL18A1P39060 MED28P5-201ENST00000528254 438 ntBASIC6.11□□□□□ -1.43
COL18A1P39060 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
COL18A1P39060 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.11□□□□□ -1.43
COL18A1P39060 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.11□□□□□ -1.43
COL18A1P39060 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL18A1P39060 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.11□□□□□ -1.43
COL18A1P39060 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL18A1P39060 AC025031.4-201ENST00000621248 3271 ntBASIC6.1□□□□□ -1.43
COL18A1P39060 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
COL18A1P39060 CPHL1P-201ENST00000461341 3407 ntBASIC6.1□□□□□ -1.43
COL18A1P39060 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL18A1P39060 AL359837.1-201ENST00000381357 287 ntBASIC6.1□□□□□ -1.43
COL18A1P39060 AL445189.1-201ENST00000405722 338 ntBASIC6.1□□□□□ -1.43
COL18A1P39060 AL358176.3-201ENST00000420757 454 ntBASIC6.1□□□□□ -1.43
COL18A1P39060 RNA5SP143-201ENST00000516936 115 ntBASIC6.1□□□□□ -1.43
COL18A1P39060 RN7SL703P-201ENST00000578485 302 ntBASIC6.1□□□□□ -1.43
COL18A1P39060 AC034229.5-201ENST00000624258 185 ntBASIC6.1□□□□□ -1.43
COL18A1P39060 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL18A1P39060 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
COL18A1P39060 AL122126.1-201ENST00000546905 1318 ntBASIC6.1□□□□□ -1.43
COL18A1P39060 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
COL18A1P39060 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL18A1P39060 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.09□□□□□ -1.43
COL18A1P39060 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.09□□□□□ -1.43
COL18A1P39060 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL18A1P39060 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL18A1P39060 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL18A1P39060 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL18A1P39060 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.09□□□□□ -1.43
COL18A1P39060 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL18A1P39060 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL18A1P39060 RNA5SP171-201ENST00000391071 115 ntBASIC6.09□□□□□ -1.43
COL18A1P39060 SDHCP2-201ENST00000398565 501 ntBASIC6.09□□□□□ -1.43
COL18A1P39060 AC025750.1-201ENST00000399891 379 ntBASIC6.09□□□□□ -1.43
COL18A1P39060 PPIAP31-201ENST00000405422 495 ntBASIC6.09□□□□□ -1.43
COL18A1P39060 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.09□□□□□ -1.43
COL18A1P39060 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.09□□□□□ -1.43
COL18A1P39060 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.09□□□□□ -1.43
COL18A1P39060 UQCRHP4-201ENST00000471686 272 ntBASIC6.09□□□□□ -1.43
COL18A1P39060 AC010476.1-201ENST00000519111 851 ntBASIC6.09□□□□□ -1.43
COL18A1P39060 OR8A2P-201ENST00000528631 952 ntBASIC6.09□□□□□ -1.43
COL18A1P39060 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC6.09□□□□□ -1.43
COL18A1P39060 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.09□□□□□ -1.43
COL18A1P39060 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.09□□□□□ -1.43
COL18A1P39060 AC006130.2-201ENST00000586202 326 ntBASIC6.09□□□□□ -1.43
COL18A1P39060 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.09□□□□□ -1.43
COL18A1P39060 OR2L1P-202ENST00000641567 1023 ntBASIC6.09□□□□□ -1.43
COL18A1P39060 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL18A1P39060 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL18A1P39060 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.09□□□□□ -1.43
COL18A1P39060 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL18A1P39060 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.09□□□□□ -1.43
COL18A1P39060 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL18A1P39060 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
COL18A1P39060 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
COL18A1P39060 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
COL18A1P39060 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL18A1P39060 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
COL18A1P39060 LINC01881-201ENST00000416103 412 ntBASIC6.08□□□□□ -1.44
COL18A1P39060 PHBP16-201ENST00000446318 950 ntBASIC6.08□□□□□ -1.44
COL18A1P39060 RPL23AP43-201ENST00000446445 471 ntBASIC6.08□□□□□ -1.44
COL18A1P39060 snoU13.22-201ENST00000459428 104 ntBASIC6.08□□□□□ -1.44
COL18A1P39060 APOA2-207ENST00000470459 416 ntTSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms