Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RPS29P9-201ENST00000440360 171 ntBASIC6.4□□□□□ -1.39
COL15A1P39059 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.4□□□□□ -1.39
COL15A1P39059 AC015908.1-201ENST00000478739 476 ntBASIC6.4□□□□□ -1.39
COL15A1P39059 RN7SL441P-201ENST00000492388 296 ntBASIC6.4□□□□□ -1.39
COL15A1P39059 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.4□□□□□ -1.39
COL15A1P39059 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.4□□□□□ -1.39
COL15A1P39059 AC016550.1-201ENST00000505348 785 ntBASIC6.4□□□□□ -1.39
COL15A1P39059 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.4□□□□□ -1.39
COL15A1P39059 RNU6-1334P-201ENST00000516032 105 ntBASIC6.4□□□□□ -1.39
COL15A1P39059 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.4□□□□□ -1.39
COL15A1P39059 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
COL15A1P39059 RN7SL690P-201ENST00000582087 240 ntBASIC6.4□□□□□ -1.39
COL15A1P39059 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.4□□□□□ -1.39
COL15A1P39059 AL671309.1-201ENST00000603750 544 ntBASIC6.4□□□□□ -1.39
COL15A1P39059 AP001521.2-201ENST00000608772 546 ntBASIC6.4□□□□□ -1.39
COL15A1P39059 AL355816.2-201ENST00000610049 647 ntBASIC6.4□□□□□ -1.39
COL15A1P39059 AC108359.1-201ENST00000616451 1211 ntBASIC6.4□□□□□ -1.39
COL15A1P39059 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.39
COL15A1P39059 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.39
COL15A1P39059 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
COL15A1P39059 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
COL15A1P39059 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
COL15A1P39059 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
COL15A1P39059 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL15A1P39059 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL15A1P39059 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL15A1P39059 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
COL15A1P39059 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL15A1P39059 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL15A1P39059 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.39□□□□□ -1.39
COL15A1P39059 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.39□□□□□ -1.39
COL15A1P39059 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL15A1P39059 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL15A1P39059 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL15A1P39059 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL15A1P39059 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
COL15A1P39059 AL356967.1-201ENST00000406305 431 ntBASIC6.39□□□□□ -1.39
COL15A1P39059 ARAFP1-201ENST00000422172 605 ntBASIC6.39□□□□□ -1.39
COL15A1P39059 RPL18P10-201ENST00000425606 538 ntBASIC6.39□□□□□ -1.39
COL15A1P39059 AC023141.6-201ENST00000429418 337 ntBASIC6.39□□□□□ -1.39
COL15A1P39059 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.39□□□□□ -1.39
COL15A1P39059 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.39□□□□□ -1.39
COL15A1P39059 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.39□□□□□ -1.39
COL15A1P39059 AURKAPS2-201ENST00000454983 333 ntBASIC6.39□□□□□ -1.39
COL15A1P39059 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.39□□□□□ -1.39
COL15A1P39059 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.39□□□□□ -1.39
COL15A1P39059 AC138409.2-202ENST00000507274 458 ntBASIC6.39□□□□□ -1.39
COL15A1P39059 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.39□□□□□ -1.39
COL15A1P39059 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.39□□□□□ -1.39
COL15A1P39059 AC034205.1-201ENST00000520621 638 ntBASIC6.39□□□□□ -1.39
COL15A1P39059 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
COL15A1P39059 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.39□□□□□ -1.39
COL15A1P39059 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.39□□□□□ -1.39
COL15A1P39059 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.39□□□□□ -1.39
COL15A1P39059 AC011458.1-201ENST00000604034 617 ntBASIC6.39□□□□□ -1.39
COL15A1P39059 AP001153.1-201ENST00000641024 338 ntBASIC6.39□□□□□ -1.39
COL15A1P39059 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.39□□□□□ -1.39
COL15A1P39059 AC099654.2-201ENST00000433031 1980 ntBASIC6.39□□□□□ -1.39
COL15A1P39059 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
COL15A1P39059 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
COL15A1P39059 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL15A1P39059 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.39□□□□□ -1.39
COL15A1P39059 AP005432.1-201ENST00000580891 3485 ntBASIC6.39□□□□□ -1.39
COL15A1P39059 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.39□□□□□ -1.39
COL15A1P39059 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL15A1P39059 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
COL15A1P39059 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.38□□□□□ -1.39
COL15A1P39059 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL15A1P39059 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL15A1P39059 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL15A1P39059 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.38□□□□□ -1.39
COL15A1P39059 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL15A1P39059 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.38□□□□□ -1.39
COL15A1P39059 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL15A1P39059 AL356317.1-201ENST00000396110 1436 ntBASIC6.38□□□□□ -1.39
COL15A1P39059 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL15A1P39059 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.38□□□□□ -1.39
COL15A1P39059 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.38□□□□□ -1.39
COL15A1P39059 AL136520.1-201ENST00000600311 1322 ntBASIC6.38□□□□□ -1.39
COL15A1P39059 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL15A1P39059 AC068538.1-201ENST00000376856 336 ntBASIC6.38□□□□□ -1.39
COL15A1P39059 SNORA2.3-201ENST00000383920 135 ntBASIC6.38□□□□□ -1.39
COL15A1P39059 P2RY10P2-201ENST00000416730 913 ntBASIC6.38□□□□□ -1.39
COL15A1P39059 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.38□□□□□ -1.39
COL15A1P39059 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.38□□□□□ -1.39
COL15A1P39059 RPL7AP61-201ENST00000443410 636 ntBASIC6.38□□□□□ -1.39
COL15A1P39059 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL15A1P39059 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.38□□□□□ -1.39
COL15A1P39059 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.38□□□□□ -1.39
COL15A1P39059 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.38□□□□□ -1.39
COL15A1P39059 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.38□□□□□ -1.39
COL15A1P39059 NPM1P52-201ENST00000518264 846 ntBASIC6.38□□□□□ -1.39
COL15A1P39059 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.38□□□□□ -1.39
COL15A1P39059 AP001880.2-201ENST00000538233 448 ntBASIC6.38□□□□□ -1.39
COL15A1P39059 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.38□□□□□ -1.39
COL15A1P39059 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.38□□□□□ -1.39
COL15A1P39059 AC022884.2-201ENST00000578535 580 ntBASIC6.38□□□□□ -1.39
COL15A1P39059 AC126365.2-201ENST00000580630 379 ntBASIC6.38□□□□□ -1.39
COL15A1P39059 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.38□□□□□ -1.39
COL15A1P39059 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms