Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.74□□□□□ -1.49
BDNFP23560 RPS23P9-201ENST00000448848 438 ntBASIC5.74□□□□□ -1.49
BDNFP23560 AL672138.1-201ENST00000450604 1015 ntBASIC5.74□□□□□ -1.49
BDNFP23560 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
BDNFP23560 RN7SL30P-201ENST00000488416 306 ntBASIC5.74□□□□□ -1.49
BDNFP23560 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
BDNFP23560 AC109464.1-201ENST00000511091 819 ntBASIC5.74□□□□□ -1.49
BDNFP23560 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.74□□□□□ -1.49
BDNFP23560 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.74□□□□□ -1.49
BDNFP23560 RNA5SP92-201ENST00000516437 110 ntBASIC5.74□□□□□ -1.49
BDNFP23560 SNORA31.13-201ENST00000516624 135 ntBASIC5.74□□□□□ -1.49
BDNFP23560 AC022790.1-201ENST00000522872 204 ntBASIC5.74□□□□□ -1.49
BDNFP23560 HMGB1P40-201ENST00000525121 540 ntBASIC5.74□□□□□ -1.49
BDNFP23560 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.74□□□□□ -1.49
BDNFP23560 AC004825.1-201ENST00000555068 586 ntBASIC5.74□□□□□ -1.49
BDNFP23560 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.74□□□□□ -1.49
BDNFP23560 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.74□□□□□ -1.49
BDNFP23560 AC106730.2-201ENST00000566641 540 ntBASIC5.74□□□□□ -1.49
BDNFP23560 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BDNFP23560 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.74□□□□□ -1.49
BDNFP23560 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.74□□□□□ -1.49
BDNFP23560 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.74□□□□□ -1.49
BDNFP23560 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.74□□□□□ -1.49
BDNFP23560 AC025857.2-201ENST00000602711 238 ntBASIC5.74□□□□□ -1.49
BDNFP23560 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.74□□□□□ -1.49
BDNFP23560 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.74□□□□□ -1.49
BDNFP23560 AL354696.1-201ENST00000614652 497 ntBASIC5.74□□□□□ -1.49
BDNFP23560 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.74□□□□□ -1.49
BDNFP23560 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BDNFP23560 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.74□□□□□ -1.49
BDNFP23560 AC091948.2-201ENST00000636510 279 ntBASIC5.74□□□□□ -1.49
BDNFP23560 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
BDNFP23560 AC073869.8-201ENST00000641806 335 ntBASIC5.74□□□□□ -1.49
BDNFP23560 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
BDNFP23560 RNF6P1-201ENST00000444889 1784 ntBASIC5.74□□□□□ -1.49
BDNFP23560 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BDNFP23560 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BDNFP23560 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BDNFP23560 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
BDNFP23560 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BDNFP23560 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BDNFP23560 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BDNFP23560 AC021242.1-201ENST00000507315 2035 ntBASIC5.74□□□□□ -1.49
BDNFP23560 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.74□□□□□ -1.49
BDNFP23560 USP9YP4-201ENST00000424401 1745 ntBASIC5.74□□□□□ -1.49
BDNFP23560 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BDNFP23560 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BDNFP23560 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
BDNFP23560 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BDNFP23560 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.73□□□□□ -1.49
BDNFP23560 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BDNFP23560 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.73□□□□□ -1.49
BDNFP23560 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
BDNFP23560 GVINP1-202ENST00000531871 7271 ntBASIC5.73□□□□□ -1.49
BDNFP23560 C4BPAP1-201ENST00000415474 1893 ntBASIC5.73□□□□□ -1.49
BDNFP23560 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.73□□□□□ -1.49
BDNFP23560 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BDNFP23560 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.73□□□□□ -1.49
BDNFP23560 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.73□□□□□ -1.49
BDNFP23560 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
BDNFP23560 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.73□□□□□ -1.49
BDNFP23560 SETP15-201ENST00000412724 337 ntBASIC5.73□□□□□ -1.49
BDNFP23560 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.73□□□□□ -1.49
BDNFP23560 BMS1P13-201ENST00000417301 885 ntBASIC5.73□□□□□ -1.49
BDNFP23560 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.73□□□□□ -1.49
BDNFP23560 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.73□□□□□ -1.49
BDNFP23560 NANOGP4-201ENST00000427230 913 ntBASIC5.73□□□□□ -1.49
BDNFP23560 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.73□□□□□ -1.49
BDNFP23560 FAM96AP1-201ENST00000430879 482 ntBASIC5.73□□□□□ -1.49
BDNFP23560 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.73□□□□□ -1.49
BDNFP23560 LINC02210-201ENST00000444561 288 ntBASIC5.73□□□□□ -1.49
BDNFP23560 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
BDNFP23560 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.73□□□□□ -1.49
BDNFP23560 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.73□□□□□ -1.49
BDNFP23560 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.73□□□□□ -1.49
BDNFP23560 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.73□□□□□ -1.49
BDNFP23560 RN7SL799P-201ENST00000475891 298 ntBASIC5.73□□□□□ -1.49
BDNFP23560 RPS21P4-201ENST00000487122 248 ntBASIC5.73□□□□□ -1.49
BDNFP23560 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BDNFP23560 AC008638.1-201ENST00000506035 866 ntBASIC5.73□□□□□ -1.49
BDNFP23560 HIGD1AP14-201ENST00000507617 282 ntBASIC5.73□□□□□ -1.49
BDNFP23560 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.73□□□□□ -1.49
BDNFP23560 AC103833.1-201ENST00000517442 172 ntBASIC5.73□□□□□ -1.49
BDNFP23560 CDC42P3-201ENST00000518493 633 ntBASIC5.73□□□□□ -1.49
BDNFP23560 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.73□□□□□ -1.49
BDNFP23560 AC136777.2-201ENST00000522979 358 ntBASIC5.73□□□□□ -1.49
BDNFP23560 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.73□□□□□ -1.49
BDNFP23560 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
BDNFP23560 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.73□□□□□ -1.49
BDNFP23560 AP005262.1-201ENST00000582646 997 ntBASIC5.73□□□□□ -1.49
BDNFP23560 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.73□□□□□ -1.49
BDNFP23560 OR7E18P-201ENST00000592589 702 ntBASIC5.73□□□□□ -1.49
BDNFP23560 OR4H6P-202ENST00000603819 340 ntBASIC5.73□□□□□ -1.49
BDNFP23560 AC013244.1-201ENST00000604279 193 ntBASIC5.73□□□□□ -1.49
BDNFP23560 AC017076.1-201ENST00000607613 578 ntBASIC5.73□□□□□ -1.49
BDNFP23560 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
BDNFP23560 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.73□□□□□ -1.49
BDNFP23560 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BDNFP23560 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
BDNFP23560 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms