Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH3P22223 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH3P22223 AL034549.2-201ENST00000618285 3373 ntBASIC5.13□□□□□ -1.59
CDH3P22223 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH3P22223 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH3P22223 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH3P22223 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH3P22223 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH3P22223 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDH3P22223 DBIP1-201ENST00000401435 260 ntBASIC5.13□□□□□ -1.59
CDH3P22223 PPIAP9-201ENST00000403866 498 ntBASIC5.13□□□□□ -1.59
CDH3P22223 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH3P22223 MIR1271-201ENST00000408537 86 ntBASIC5.13□□□□□ -1.59
CDH3P22223 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.13□□□□□ -1.59
CDH3P22223 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.13□□□□□ -1.59
CDH3P22223 BRWD1P3-201ENST00000428816 390 ntBASIC5.13□□□□□ -1.59
CDH3P22223 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH3P22223 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH3P22223 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH3P22223 AL035090.1-201ENST00000454835 332 ntBASIC5.13□□□□□ -1.59
CDH3P22223 AC005532.2-201ENST00000467154 373 ntBASIC5.13□□□□□ -1.59
CDH3P22223 RN7SL222P-201ENST00000476452 299 ntBASIC5.13□□□□□ -1.59
CDH3P22223 AC147055.3-201ENST00000510547 851 ntBASIC5.13□□□□□ -1.59
CDH3P22223 AC091912.1-201ENST00000511351 248 ntBASIC5.13□□□□□ -1.59
CDH3P22223 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH3P22223 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH3P22223 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH3P22223 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CDH3P22223 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH3P22223 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH3P22223 OR8K2P-201ENST00000524645 927 ntBASIC5.13□□□□□ -1.59
CDH3P22223 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH3P22223 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CDH3P22223 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH3P22223 OR11H3P-201ENST00000554547 982 ntBASIC5.13□□□□□ -1.59
CDH3P22223 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH3P22223 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
CDH3P22223 AC114947.2-201ENST00000565748 2125 ntBASIC5.13□□□□□ -1.59
CDH3P22223 AC016769.4-201ENST00000616893 535 ntBASIC5.13□□□□□ -1.59
CDH3P22223 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH3P22223 AC135068.5-201ENST00000624197 983 ntBASIC5.13□□□□□ -1.59
CDH3P22223 AP000720.1-201ENST00000625091 483 ntBASIC5.13□□□□□ -1.59
CDH3P22223 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH3P22223 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH3P22223 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH3P22223 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH3P22223 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH3P22223 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH3P22223 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH3P22223 AC024341.1-201ENST00000526444 1552 ntBASIC5.12□□□□□ -1.59
CDH3P22223 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH3P22223 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH3P22223 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH3P22223 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH3P22223 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH3P22223 RPL23P2-201ENST00000320371 421 ntBASIC5.12□□□□□ -1.59
CDH3P22223 U3.2-201ENST00000362981 210 ntBASIC5.12□□□□□ -1.59
CDH3P22223 SNORA74A-201ENST00000364089 198 ntBASIC5.12□□□□□ -1.59
CDH3P22223 DUTP5-201ENST00000406790 469 ntBASIC5.12□□□□□ -1.59
CDH3P22223 DPPA2P3-201ENST00000411853 655 ntBASIC5.12□□□□□ -1.59
CDH3P22223 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH3P22223 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH3P22223 AC012519.1-201ENST00000424588 610 ntBASIC5.12□□□□□ -1.59
CDH3P22223 LYPLA1P1-201ENST00000434514 622 ntBASIC5.12□□□□□ -1.59
CDH3P22223 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH3P22223 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH3P22223 MTND4P15-201ENST00000437913 1033 ntBASIC5.12□□□□□ -1.59
CDH3P22223 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH3P22223 EEF1B2P5-201ENST00000444820 548 ntBASIC5.12□□□□□ -1.59
CDH3P22223 AC104634.1-201ENST00000452720 462 ntBASIC5.12□□□□□ -1.59
CDH3P22223 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH3P22223 RPL7P6-201ENST00000480903 738 ntBASIC5.12□□□□□ -1.59
CDH3P22223 RN7SL727P-201ENST00000482164 296 ntBASIC5.12□□□□□ -1.59
CDH3P22223 AC004815.1-201ENST00000484185 331 ntBASIC5.12□□□□□ -1.59
CDH3P22223 AC008953.1-201ENST00000497334 318 ntBASIC5.12□□□□□ -1.59
CDH3P22223 AK4P6-201ENST00000505168 528 ntBASIC5.12□□□□□ -1.59
CDH3P22223 RPS4XP20-201ENST00000505751 772 ntBASIC5.12□□□□□ -1.59
CDH3P22223 AC022832.1-201ENST00000530718 645 ntBASIC5.12□□□□□ -1.59
CDH3P22223 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH3P22223 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH3P22223 AC074029.2-201ENST00000551045 634 ntBASIC5.12□□□□□ -1.59
CDH3P22223 AC044860.2-201ENST00000561005 179 ntBASIC5.12□□□□□ -1.59
CDH3P22223 RN7SL290P-201ENST00000578661 300 ntBASIC5.12□□□□□ -1.59
CDH3P22223 AC092474.3-201ENST00000603022 568 ntBASIC5.12□□□□□ -1.59
CDH3P22223 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH3P22223 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH3P22223 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.12□□□□□ -1.59
CDH3P22223 RPSAP73-201ENST00000614820 330 ntBASIC5.12□□□□□ -1.59
CDH3P22223 AC018445.2-201ENST00000622987 260 ntBASIC5.12□□□□□ -1.59
CDH3P22223 LINC00216-201ENST00000623548 1126 ntBASIC5.12□□□□□ -1.59
CDH3P22223 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH3P22223 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDH3P22223 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDH3P22223 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH3P22223 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.12□□□□□ -1.59
CDH3P22223 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CDH3P22223 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CDH3P22223 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH3P22223 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH3P22223 DDX18P3-201ENST00000404856 2007 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms