Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 ATP5C1P1-201ENST00000441945 895 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 DNAJC19P5-201ENST00000443295 316 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 HIGD1AP16-201ENST00000450986 258 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 AC097262.1-201ENST00000452559 548 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 DNAJB5P1-201ENST00000454004 806 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 ANK3-207ENST00000460468 677 ntTSL 3 BASIC7.26□□□□□ -1.25
ERCC3P19447 AL161747.1-201ENST00000480068 358 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC3P19447 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.26□□□□□ -1.25
ERCC3P19447 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.26□□□□□ -1.25
ERCC3P19447 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC7.26□□□□□ -1.25
ERCC3P19447 PRMT5P1-201ENST00000514351 598 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.26□□□□□ -1.25
ERCC3P19447 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC3P19447 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.26□□□□□ -1.25
ERCC3P19447 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC3P19447 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.26□□□□□ -1.25
ERCC3P19447 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC3P19447 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC3P19447 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC7.26□□□□□ -1.25
ERCC3P19447 AC027243.2-201ENST00000602530 724 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 AC103881.1-201ENST00000603476 538 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 AC133552.5-201ENST00000604266 540 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC7.26□□□□□ -1.25
ERCC3P19447 AL512652.1-201ENST00000619006 500 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC3P19447 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
ERCC3P19447 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.26□□□□□ -1.25
ERCC3P19447 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.26□□□□□ -1.25
ERCC3P19447 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC3P19447 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
ERCC3P19447 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.26□□□□□ -1.25
ERCC3P19447 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
ERCC3P19447 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC3P19447 AC062022.1-201ENST00000451026 1684 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC3P19447 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC3P19447 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC3P19447 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.25□□□□□ -1.25
ERCC3P19447 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.25□□□□□ -1.25
ERCC3P19447 DDX43P2-201ENST00000604753 1354 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC3P19447 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC7.25□□□□□ -1.25
ERCC3P19447 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC3P19447 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
ERCC3P19447 RNA5SP510-201ENST00000364697 99 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 SUGT1P2-201ENST00000379452 992 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 SNORA70.9-201ENST00000384370 135 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 SNORA51.12-201ENST00000384448 134 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 RPS3AP26-201ENST00000398259 784 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 RPL23AP47-201ENST00000408017 460 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 RN7SKP121-201ENST00000410842 305 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 TPT1P2-201ENST00000413105 503 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.25□□□□□ -1.25
ERCC3P19447 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC7.25□□□□□ -1.25
ERCC3P19447 AL713922.1-201ENST00000416477 747 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 TRBV24OR9-2-201ENST00000416632 435 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.25□□□□□ -1.25
ERCC3P19447 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.25□□□□□ -1.25
ERCC3P19447 AL050321.1-201ENST00000432363 400 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC7.25□□□□□ -1.25
ERCC3P19447 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC7.25□□□□□ -1.25
ERCC3P19447 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.25□□□□□ -1.25
ERCC3P19447 RPL7P59-201ENST00000447700 943 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC7.25□□□□□ -1.25
ERCC3P19447 TPMTP4-201ENST00000450749 678 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 AL139156.3-201ENST00000454802 394 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.25□□□□□ -1.25
ERCC3P19447 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.25□□□□□ -1.25
ERCC3P19447 AC015724.1-201ENST00000478577 156 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC7.25□□□□□ -1.25
ERCC3P19447 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC7.25□□□□□ -1.25
ERCC3P19447 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.25□□□□□ -1.25
ERCC3P19447 AC073581.1-201ENST00000519036 575 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC7.25□□□□□ -1.25
ERCC3P19447 AP001189.2-201ENST00000527320 189 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC3P19447 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.25□□□□□ -1.25
ERCC3P19447 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.25□□□□□ -1.25
ERCC3P19447 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.25□□□□□ -1.25
ERCC3P19447 ACTR3BP3-201ENST00000565577 979 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.25□□□□□ -1.25
ERCC3P19447 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.25□□□□□ -1.25
ERCC3P19447 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.25□□□□□ -1.25
ERCC3P19447 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC7.25□□□□□ -1.25
ERCC3P19447 AL137072.1-201ENST00000603444 466 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 AL592221.1-201ENST00000605266 382 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.25□□□□□ -1.25
ERCC3P19447 AC004223.4-201ENST00000612426 332 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 AC008083.4-201ENST00000615076 444 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 AC008443.7-201ENST00000622195 246 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 AC129778.1-202ENST00000623812 261 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC7.25□□□□□ -1.25
ERCC3P19447 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC3P19447 AL591379.1-207ENST00000635982 261 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 AC099654.6-201ENST00000636487 512 ntBASIC7.25□□□□□ -1.25
ERCC3P19447 MIR4302-201ENST00000638058 60 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms