Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC119501.1-201ENST00000603646 475 ntBASIC5.77□□□□□ -1.49
TOP1P11387 AC100827.5-201ENST00000615883 426 ntBASIC5.77□□□□□ -1.49
TOP1P11387 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.77□□□□□ -1.49
TOP1P11387 AC019206.1-201ENST00000621938 425 ntBASIC5.77□□□□□ -1.49
TOP1P11387 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.77□□□□□ -1.49
TOP1P11387 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TOP1P11387 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.77□□□□□ -1.49
TOP1P11387 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
TOP1P11387 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.77□□□□□ -1.49
TOP1P11387 TCP1P3-201ENST00000414406 1498 ntBASIC5.77□□□□□ -1.49
TOP1P11387 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
TOP1P11387 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.76□□□□□ -1.49
TOP1P11387 AC132825.1-201ENST00000463573 2247 ntBASIC5.76□□□□□ -1.49
TOP1P11387 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.76□□□□□ -1.49
TOP1P11387 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TOP1P11387 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TOP1P11387 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TOP1P11387 AL035419.1-201ENST00000397037 564 ntBASIC5.76□□□□□ -1.49
TOP1P11387 GAPDHP15-201ENST00000398586 975 ntBASIC5.76□□□□□ -1.49
TOP1P11387 RPL10P10-201ENST00000403509 664 ntBASIC5.76□□□□□ -1.49
TOP1P11387 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.76□□□□□ -1.49
TOP1P11387 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.76□□□□□ -1.49
TOP1P11387 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.76□□□□□ -1.49
TOP1P11387 AL049745.1-201ENST00000433953 286 ntBASIC5.76□□□□□ -1.49
TOP1P11387 AC008072.1-201ENST00000434254 824 ntBASIC5.76□□□□□ -1.49
TOP1P11387 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.76□□□□□ -1.49
TOP1P11387 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.76□□□□□ -1.49
TOP1P11387 SLC25A18P1-201ENST00000449385 454 ntBASIC5.76□□□□□ -1.49
TOP1P11387 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.76□□□□□ -1.49
TOP1P11387 AC091685.2-201ENST00000454924 864 ntBASIC5.76□□□□□ -1.49
TOP1P11387 AC116562.1-201ENST00000485355 781 ntBASIC5.76□□□□□ -1.49
TOP1P11387 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.76□□□□□ -1.49
TOP1P11387 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.76□□□□□ -1.49
TOP1P11387 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.76□□□□□ -1.49
TOP1P11387 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TOP1P11387 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.76□□□□□ -1.49
TOP1P11387 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.76□□□□□ -1.49
TOP1P11387 MIR4737-201ENST00000583979 81 ntBASIC5.76□□□□□ -1.49
TOP1P11387 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.76□□□□□ -1.49
TOP1P11387 AC104687.2-201ENST00000604442 342 ntBASIC5.76□□□□□ -1.49
TOP1P11387 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
TOP1P11387 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.76□□□□□ -1.49
TOP1P11387 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TOP1P11387 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
TOP1P11387 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
TOP1P11387 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TOP1P11387 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TOP1P11387 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
TOP1P11387 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TOP1P11387 SAMMSON-226ENST00000642089 1582 ntBASIC5.76□□□□□ -1.49
TOP1P11387 AL022393.1-201ENST00000625142 1677 ntBASIC5.75□□□□□ -1.49
TOP1P11387 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.75□□□□□ -1.49
TOP1P11387 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TOP1P11387 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
TOP1P11387 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.75□□□□□ -1.49
TOP1P11387 RNU6-673P-201ENST00000365084 104 ntBASIC5.75□□□□□ -1.49
TOP1P11387 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TOP1P11387 MIR585-201ENST00000384887 94 ntBASIC5.75□□□□□ -1.49
TOP1P11387 AC013442.1-201ENST00000397347 228 ntBASIC5.75□□□□□ -1.49
TOP1P11387 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TOP1P11387 OR5M12P-201ENST00000423388 929 ntBASIC5.75□□□□□ -1.49
TOP1P11387 SETP10-201ENST00000424368 814 ntBASIC5.75□□□□□ -1.49
TOP1P11387 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.75□□□□□ -1.49
TOP1P11387 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.75□□□□□ -1.49
TOP1P11387 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.75□□□□□ -1.49
TOP1P11387 AC063943.1-201ENST00000465434 453 ntBASIC5.75□□□□□ -1.49
TOP1P11387 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.75□□□□□ -1.49
TOP1P11387 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.75□□□□□ -1.49
TOP1P11387 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.75□□□□□ -1.49
TOP1P11387 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TOP1P11387 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.75□□□□□ -1.49
TOP1P11387 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.75□□□□□ -1.49
TOP1P11387 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.75□□□□□ -1.49
TOP1P11387 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.75□□□□□ -1.49
TOP1P11387 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
TOP1P11387 MIR3936-201ENST00000584304 110 ntBASIC5.75□□□□□ -1.49
TOP1P11387 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.75□□□□□ -1.49
TOP1P11387 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.75□□□□□ -1.49
TOP1P11387 AC011453.2-201ENST00000603737 729 ntBASIC5.75□□□□□ -1.49
TOP1P11387 CR381572.2-201ENST00000624852 397 ntBASIC5.75□□□□□ -1.49
TOP1P11387 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
TOP1P11387 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TOP1P11387 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
TOP1P11387 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TOP1P11387 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TOP1P11387 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
TOP1P11387 SDAD1P1-202ENST00000524156 2051 ntBASIC5.75□□□□□ -1.49
TOP1P11387 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.75□□□□□ -1.49
TOP1P11387 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.74□□□□□ -1.49
TOP1P11387 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.74□□□□□ -1.49
TOP1P11387 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TOP1P11387 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.74□□□□□ -1.49
TOP1P11387 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TOP1P11387 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
TOP1P11387 RN7SKP74-201ENST00000362849 309 ntBASIC5.74□□□□□ -1.49
TOP1P11387 AL357515.1-201ENST00000402967 542 ntBASIC5.74□□□□□ -1.49
TOP1P11387 AL589994.1-201ENST00000404962 340 ntBASIC5.74□□□□□ -1.49
TOP1P11387 RNA5SP113-201ENST00000410486 84 ntBASIC5.74□□□□□ -1.49
TOP1P11387 TBCAP2-201ENST00000416175 326 ntBASIC5.74□□□□□ -1.49
TOP1P11387 QRSL1P2-201ENST00000418582 964 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms