Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MFSD8-216ENST00000641147 4009 ntBASIC5.56□□□□□ -1.52
RB1P06400 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RB1P06400 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.56□□□□□ -1.52
RB1P06400 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RB1P06400 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RB1P06400 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RB1P06400 MIR133A2-201ENST00000347538 102 ntBASIC5.56□□□□□ -1.52
RB1P06400 RNA5SP428-201ENST00000365129 132 ntBASIC5.56□□□□□ -1.52
RB1P06400 SNORD51.1-201ENST00000365405 77 ntBASIC5.56□□□□□ -1.52
RB1P06400 SNORD56.6-201ENST00000384569 71 ntBASIC5.56□□□□□ -1.52
RB1P06400 RNU2-72P-201ENST00000411175 163 ntBASIC5.56□□□□□ -1.52
RB1P06400 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.56□□□□□ -1.52
RB1P06400 AC119751.6-201ENST00000416712 186 ntBASIC5.56□□□□□ -1.52
RB1P06400 AC019050.1-201ENST00000418508 492 ntBASIC5.56□□□□□ -1.52
RB1P06400 BTF3P9-201ENST00000418784 283 ntBASIC5.56□□□□□ -1.52
RB1P06400 AC092570.3-201ENST00000420113 693 ntBASIC5.56□□□□□ -1.52
RB1P06400 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.56□□□□□ -1.52
RB1P06400 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.56□□□□□ -1.52
RB1P06400 DNAJC19P7-201ENST00000428811 344 ntBASIC5.56□□□□□ -1.52
RB1P06400 RPS26P4-201ENST00000431743 355 ntBASIC5.56□□□□□ -1.52
RB1P06400 MTND2P21-201ENST00000436242 1042 ntBASIC5.56□□□□□ -1.52
RB1P06400 TPT1P12-201ENST00000448968 492 ntBASIC5.56□□□□□ -1.52
RB1P06400 NDUFA12P1-201ENST00000455914 406 ntBASIC5.56□□□□□ -1.52
RB1P06400 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.56□□□□□ -1.52
RB1P06400 AC021087.2-201ENST00000504656 1203 ntBASIC5.56□□□□□ -1.52
RB1P06400 AC021106.1-201ENST00000509020 1058 ntBASIC5.56□□□□□ -1.52
RB1P06400 OR7H2P-201ENST00000513483 306 ntBASIC5.56□□□□□ -1.52
RB1P06400 AC034244.2-201ENST00000514668 858 ntBASIC5.56□□□□□ -1.52
RB1P06400 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.56□□□□□ -1.52
RB1P06400 AC136777.2-201ENST00000522979 358 ntBASIC5.56□□□□□ -1.52
RB1P06400 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.56□□□□□ -1.52
RB1P06400 OR5AN2P-201ENST00000534535 896 ntBASIC5.56□□□□□ -1.52
RB1P06400 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.56□□□□□ -1.52
RB1P06400 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.56□□□□□ -1.52
RB1P06400 OR11H3P-201ENST00000554547 982 ntBASIC5.56□□□□□ -1.52
RB1P06400 CKS1BP1-201ENST00000555221 240 ntBASIC5.56□□□□□ -1.52
RB1P06400 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.56□□□□□ -1.52
RB1P06400 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.56□□□□□ -1.52
RB1P06400 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RB1P06400 SNX6P1-201ENST00000601728 1224 ntBASIC5.56□□□□□ -1.52
RB1P06400 AC092474.3-201ENST00000603022 568 ntBASIC5.56□□□□□ -1.52
RB1P06400 AC019131.2-201ENST00000609071 870 ntBASIC5.56□□□□□ -1.52
RB1P06400 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.56□□□□□ -1.52
RB1P06400 AC006840.1-201ENST00000623069 542 ntBASIC5.56□□□□□ -1.52
RB1P06400 AC135068.5-201ENST00000624197 983 ntBASIC5.56□□□□□ -1.52
RB1P06400 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.56□□□□□ -1.52
RB1P06400 AC000095.2-202ENST00000637415 154 ntBASIC5.56□□□□□ -1.52
RB1P06400 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RB1P06400 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.56□□□□□ -1.52
RB1P06400 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.56□□□□□ -1.52
RB1P06400 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RB1P06400 AC016745.2-201ENST00000608834 3443 ntBASIC5.56□□□□□ -1.52
RB1P06400 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RB1P06400 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.56□□□□□ -1.52
RB1P06400 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RB1P06400 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
RB1P06400 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.56□□□□□ -1.52
RB1P06400 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RB1P06400 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RB1P06400 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RB1P06400 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RB1P06400 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RB1P06400 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RB1P06400 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RB1P06400 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.55□□□□□ -1.52
RB1P06400 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RB1P06400 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
RB1P06400 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RB1P06400 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.55□□□□□ -1.52
RB1P06400 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.55□□□□□ -1.52
RB1P06400 RN7SKP113-201ENST00000363891 295 ntBASIC5.55□□□□□ -1.52
RB1P06400 U3.10-201ENST00000364459 214 ntBASIC5.55□□□□□ -1.52
RB1P06400 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.55□□□□□ -1.52
RB1P06400 RNU6-729P-201ENST00000384399 107 ntBASIC5.55□□□□□ -1.52
RB1P06400 RN7SKP114-201ENST00000410327 279 ntBASIC5.55□□□□□ -1.52
RB1P06400 RANP4-201ENST00000413361 655 ntBASIC5.55□□□□□ -1.52
RB1P06400 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RB1P06400 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.55□□□□□ -1.52
RB1P06400 AL390879.2-203ENST00000426943 1121 ntBASIC5.55□□□□□ -1.52
RB1P06400 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.55□□□□□ -1.52
RB1P06400 AL161722.2-201ENST00000434731 981 ntBASIC5.55□□□□□ -1.52
RB1P06400 MTCYBP29-201ENST00000436327 1006 ntBASIC5.55□□□□□ -1.52
RB1P06400 AC112498.1-201ENST00000444401 332 ntBASIC5.55□□□□□ -1.52
RB1P06400 AL353718.1-201ENST00000451028 517 ntBASIC5.55□□□□□ -1.52
RB1P06400 AC069277.2-201ENST00000454211 432 ntBASIC5.55□□□□□ -1.52
RB1P06400 HMGB1P3-201ENST00000502802 616 ntBASIC5.55□□□□□ -1.52
RB1P06400 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.55□□□□□ -1.52
RB1P06400 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.55□□□□□ -1.52
RB1P06400 AC021146.7-201ENST00000509604 775 ntBASIC5.55□□□□□ -1.52
RB1P06400 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.55□□□□□ -1.52
RB1P06400 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.55□□□□□ -1.52
RB1P06400 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.55□□□□□ -1.52
RB1P06400 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.55□□□□□ -1.52
RB1P06400 AP006289.1-201ENST00000538089 277 ntBASIC5.55□□□□□ -1.52
RB1P06400 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.55□□□□□ -1.52
RB1P06400 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.55□□□□□ -1.52
RB1P06400 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.55□□□□□ -1.52
RB1P06400 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.55□□□□□ -1.52
RB1P06400 AC009237.13-201ENST00000603193 276 ntBASIC5.55□□□□□ -1.52
RB1P06400 AL122125.1-201ENST00000616999 600 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms