Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 BRWD1P3-201ENST00000428816 390 ntBASIC4.8□□□□□ -1.64
HLA-DQB2P05538 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 MRPL48P1-201ENST00000445390 636 ntBASIC4.8□□□□□ -1.64
HLA-DQB2P05538 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 RN7SKP276-201ENST00000516242 268 ntBASIC4.8□□□□□ -1.64
HLA-DQB2P05538 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 SOX5P1-201ENST00000524155 1127 ntBASIC4.8□□□□□ -1.64
HLA-DQB2P05538 PCNPP1-201ENST00000552501 511 ntBASIC4.8□□□□□ -1.64
HLA-DQB2P05538 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 MIR4472-2-201ENST00000582069 67 ntBASIC4.8□□□□□ -1.64
HLA-DQB2P05538 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 AL391358.1-201ENST00000605342 190 ntBASIC4.8□□□□□ -1.64
HLA-DQB2P05538 AC073137.1-201ENST00000605636 634 ntBASIC4.8□□□□□ -1.64
HLA-DQB2P05538 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQB2P05538 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 RNU1-83P-201ENST00000363426 164 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 RNA5SP87-201ENST00000384155 118 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 AL591848.1-201ENST00000413092 322 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 AC097523.2-201ENST00000435551 652 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 AC005154.2-201ENST00000438110 379 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 RPL35AP28-201ENST00000459730 331 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 AC092324.1-201ENST00000468671 324 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 AC083982.1-201ENST00000485679 344 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 AC105233.1-201ENST00000498840 781 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 RNU2-30P-201ENST00000516209 141 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 UBE2FP2-201ENST00000566646 462 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 AC006363.1-201ENST00000603806 463 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 AC024940.4-201ENST00000605507 246 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 OR7A19P-201ENST00000608051 733 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 AC091953.3-201ENST00000623220 236 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 AC015871.5-202ENST00000623252 701 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 AL603750.1-201ENST00000624216 1717 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 SDAD1P1-202ENST00000524156 2051 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DQB2P05538 HSPA8P14-201ENST00000552265 1805 ntBASIC4.79□□□□□ -1.64
HLA-DQB2P05538 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 ZFRP1-201ENST00000457579 2970 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 AL136164.3-201ENST00000624429 3978 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 AC006484.1-201ENST00000435086 1884 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 AL022322.2-201ENST00000624072 20397 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 AL080315.1-201ENST00000406055 466 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 NPM1P40-201ENST00000412758 733 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 BX510359.2-201ENST00000417920 305 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 RN7SL610P-201ENST00000463845 291 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 AC020937.1-201ENST00000519677 1013 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 OR5D15P-201ENST00000531671 942 ntBASIC4.78□□□□□ -1.64
HLA-DQB2P05538 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DQB2P05538 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms