Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.16□□□□□ -1.58
APOEP02649 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.16□□□□□ -1.58
APOEP02649 AC073575.2-201ENST00000614212 627 ntBASIC5.16□□□□□ -1.58
APOEP02649 AL049794.2-201ENST00000616301 365 ntBASIC5.16□□□□□ -1.58
APOEP02649 AL731566.1-201ENST00000620490 1937 ntBASIC5.16□□□□□ -1.58
APOEP02649 MIPEPP2-201ENST00000422560 1819 ntBASIC5.16□□□□□ -1.58
APOEP02649 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.16□□□□□ -1.58
APOEP02649 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.16□□□□□ -1.58
APOEP02649 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
APOEP02649 TET1P1-201ENST00000426627 2301 ntBASIC5.15□□□□□ -1.58
APOEP02649 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
APOEP02649 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
APOEP02649 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
APOEP02649 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
APOEP02649 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
APOEP02649 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.15□□□□□ -1.58
APOEP02649 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
APOEP02649 AC099654.2-201ENST00000433031 1980 ntBASIC5.15□□□□□ -1.58
APOEP02649 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.15□□□□□ -1.58
APOEP02649 AC120338.1-201ENST00000625074 1541 ntBASIC5.15□□□□□ -1.58
APOEP02649 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
APOEP02649 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.15□□□□□ -1.59
APOEP02649 AC013442.1-201ENST00000397347 228 ntBASIC5.15□□□□□ -1.59
APOEP02649 COX6B1P1-201ENST00000415962 213 ntBASIC5.15□□□□□ -1.59
APOEP02649 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.15□□□□□ -1.59
APOEP02649 AL450023.3-201ENST00000440592 271 ntBASIC5.15□□□□□ -1.59
APOEP02649 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
APOEP02649 AC112498.1-201ENST00000444401 332 ntBASIC5.15□□□□□ -1.59
APOEP02649 AL356981.1-201ENST00000454879 684 ntBASIC5.15□□□□□ -1.59
APOEP02649 AC116562.1-201ENST00000485355 781 ntBASIC5.15□□□□□ -1.59
APOEP02649 RPL23AP53-201ENST00000521854 457 ntBASIC5.15□□□□□ -1.59
APOEP02649 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.15□□□□□ -1.59
APOEP02649 PCNPP1-201ENST00000552501 511 ntBASIC5.15□□□□□ -1.59
APOEP02649 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.15□□□□□ -1.59
APOEP02649 MIR4443-201ENST00000585052 53 ntBASIC5.15□□□□□ -1.59
APOEP02649 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.15□□□□□ -1.59
APOEP02649 AP002884.5-201ENST00000595053 1132 ntBASIC5.15□□□□□ -1.59
APOEP02649 AC005084.1-201ENST00000605160 304 ntBASIC5.15□□□□□ -1.59
APOEP02649 BX323046.1-201ENST00000610145 535 ntBASIC5.15□□□□□ -1.59
APOEP02649 AF117829.2-201ENST00000619538 361 ntBASIC5.15□□□□□ -1.59
APOEP02649 AC074140.1-201ENST00000621617 208 ntBASIC5.15□□□□□ -1.59
APOEP02649 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.15□□□□□ -1.59
APOEP02649 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.15□□□□□ -1.59
APOEP02649 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.15□□□□□ -1.59
APOEP02649 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
APOEP02649 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.15□□□□□ -1.59
APOEP02649 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
APOEP02649 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
APOEP02649 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
APOEP02649 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
APOEP02649 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.14□□□□□ -1.59
APOEP02649 SNORA51.8-201ENST00000384234 132 ntBASIC5.14□□□□□ -1.59
APOEP02649 MIR550A3-201ENST00000390735 95 ntBASIC5.14□□□□□ -1.59
APOEP02649 OR2AM1P-201ENST00000422137 422 ntBASIC5.14□□□□□ -1.59
APOEP02649 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.14□□□□□ -1.59
APOEP02649 RPL7P11-201ENST00000437586 658 ntBASIC5.14□□□□□ -1.59
APOEP02649 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.14□□□□□ -1.59
APOEP02649 AC073648.4-201ENST00000442655 781 ntBASIC5.14□□□□□ -1.59
APOEP02649 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.14□□□□□ -1.59
APOEP02649 AC090142.2-201ENST00000483263 416 ntBASIC5.14□□□□□ -1.59
APOEP02649 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
APOEP02649 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
APOEP02649 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
APOEP02649 AC008033.2-201ENST00000542626 177 ntBASIC5.14□□□□□ -1.59
APOEP02649 BNIP3P1-201ENST00000547295 580 ntBASIC5.14□□□□□ -1.59
APOEP02649 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
APOEP02649 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.14□□□□□ -1.59
APOEP02649 AC084759.1-201ENST00000561168 290 ntBASIC5.14□□□□□ -1.59
APOEP02649 OR1F2P-201ENST00000570470 933 ntBASIC5.14□□□□□ -1.59
APOEP02649 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.14□□□□□ -1.59
APOEP02649 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.14□□□□□ -1.59
APOEP02649 AP001521.2-201ENST00000608772 546 ntBASIC5.14□□□□□ -1.59
APOEP02649 MIR6730-201ENST00000622213 67 ntBASIC5.14□□□□□ -1.59
APOEP02649 CDC27P2-201ENST00000425026 1922 ntBASIC5.14□□□□□ -1.59
APOEP02649 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
APOEP02649 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
APOEP02649 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.14□□□□□ -1.59
APOEP02649 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
APOEP02649 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.14□□□□□ -1.59
APOEP02649 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.14□□□□□ -1.59
APOEP02649 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
APOEP02649 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
APOEP02649 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.13□□□□□ -1.59
APOEP02649 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
APOEP02649 AL034370.1-201ENST00000397254 1590 ntBASIC5.13□□□□□ -1.59
APOEP02649 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOEP02649 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
APOEP02649 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOEP02649 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
APOEP02649 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOEP02649 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
APOEP02649 TRAV35-201ENST00000390462 330 ntBASIC5.13□□□□□ -1.59
APOEP02649 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
APOEP02649 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.13□□□□□ -1.59
APOEP02649 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.13□□□□□ -1.59
APOEP02649 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.13□□□□□ -1.59
APOEP02649 AL358176.3-201ENST00000420757 454 ntBASIC5.13□□□□□ -1.59
APOEP02649 OR2AH1P-201ENST00000425717 928 ntBASIC5.13□□□□□ -1.59
APOEP02649 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.13□□□□□ -1.59
APOEP02649 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms