Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFP01375 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
TNFP01375 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFP01375 TLK1P1-201ENST00000456760 2440 ntBASIC4.72□□□□□ -1.65
TNFP01375 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
TNFP01375 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
TNFP01375 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
TNFP01375 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TNFP01375 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TNFP01375 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.71□□□□□ -1.66
TNFP01375 RPS3AP23-201ENST00000401762 784 ntBASIC4.71□□□□□ -1.66
TNFP01375 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.71□□□□□ -1.66
TNFP01375 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.71□□□□□ -1.66
TNFP01375 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.71□□□□□ -1.66
TNFP01375 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.71□□□□□ -1.66
TNFP01375 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
TNFP01375 RN7SKP92-201ENST00000517266 244 ntBASIC4.71□□□□□ -1.66
TNFP01375 RAB9BP1-201ENST00000519581 626 ntBASIC4.71□□□□□ -1.66
TNFP01375 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.71□□□□□ -1.66
TNFP01375 GTF2IP11-201ENST00000526931 420 ntBASIC4.71□□□□□ -1.66
TNFP01375 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.71□□□□□ -1.66
TNFP01375 GSTP1P1-201ENST00000548078 319 ntBASIC4.71□□□□□ -1.66
TNFP01375 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.71□□□□□ -1.66
TNFP01375 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.71□□□□□ -1.66
TNFP01375 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.71□□□□□ -1.66
TNFP01375 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.71□□□□□ -1.66
TNFP01375 AGGF1P9-201ENST00000561884 913 ntBASIC4.71□□□□□ -1.66
TNFP01375 AC127024.5-201ENST00000580085 462 ntBASIC4.71□□□□□ -1.66
TNFP01375 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.71□□□□□ -1.66
TNFP01375 AC010487.1-201ENST00000594408 1172 ntBASIC4.71□□□□□ -1.66
TNFP01375 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.71□□□□□ -1.66
TNFP01375 AC012414.7-202ENST00000622705 1090 ntBASIC4.71□□□□□ -1.66
TNFP01375 MIR7641-1-201ENST00000627518 61 ntBASIC4.71□□□□□ -1.66
TNFP01375 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.71□□□□□ -1.66
TNFP01375 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.71□□□□□ -1.66
TNFP01375 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TNFP01375 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TNFP01375 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TNFP01375 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.71□□□□□ -1.66
TNFP01375 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TNFP01375 AC010928.1-201ENST00000592477 1447 ntBASIC4.71□□□□□ -1.66
TNFP01375 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TNFP01375 AL442639.1-201ENST00000625030 1899 ntBASIC4.71□□□□□ -1.66
TNFP01375 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFP01375 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TNFP01375 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFP01375 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TNFP01375 MFSD8-216ENST00000641147 4009 ntBASIC4.7□□□□□ -1.66
TNFP01375 OR4K15-201ENST00000305051 1216 ntBASIC4.7□□□□□ -1.66
TNFP01375 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TNFP01375 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TNFP01375 AC017078.1-201ENST00000416146 368 ntBASIC4.7□□□□□ -1.66
TNFP01375 AC069213.2-201ENST00000420238 366 ntBASIC4.7□□□□□ -1.66
TNFP01375 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFP01375 AC009220.1-201ENST00000451614 275 ntBASIC4.7□□□□□ -1.66
TNFP01375 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFP01375 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFP01375 AC096741.1-201ENST00000472250 846 ntBASIC4.7□□□□□ -1.66
TNFP01375 RPL12P20-201ENST00000475538 479 ntBASIC4.7□□□□□ -1.66
TNFP01375 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.7□□□□□ -1.66
TNFP01375 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFP01375 AC091868.1-201ENST00000508746 304 ntBASIC4.7□□□□□ -1.66
TNFP01375 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.7□□□□□ -1.66
TNFP01375 OR51K1P-201ENST00000510214 950 ntBASIC4.7□□□□□ -1.66
TNFP01375 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFP01375 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFP01375 RNU2-30P-201ENST00000516209 141 ntBASIC4.7□□□□□ -1.66
TNFP01375 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFP01375 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.7□□□□□ -1.66
TNFP01375 RN7SL652P-201ENST00000577769 300 ntBASIC4.7□□□□□ -1.66
TNFP01375 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFP01375 AF230666.2-201ENST00000602328 725 ntBASIC4.7□□□□□ -1.66
TNFP01375 AC008745.1-201ENST00000604064 271 ntBASIC4.7□□□□□ -1.66
TNFP01375 BX005214.3-202ENST00000619809 325 ntBASIC4.7□□□□□ -1.66
TNFP01375 MIR7703-201ENST00000620784 77 ntBASIC4.7□□□□□ -1.66
TNFP01375 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFP01375 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TNFP01375 AC002525.1-201ENST00000624392 1622 ntBASIC4.7□□□□□ -1.66
TNFP01375 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFP01375 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFP01375 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFP01375 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.7□□□□□ -1.66
TNFP01375 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TNFP01375 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TNFP01375 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
TNFP01375 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TNFP01375 AP005432.1-201ENST00000580891 3485 ntBASIC4.7□□□□□ -1.66
TNFP01375 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TNFP01375 MAPK10-338ENST00000641647 3362 ntBASIC4.7□□□□□ -1.66
TNFP01375 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.69□□□□□ -1.66
TNFP01375 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TNFP01375 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TNFP01375 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TNFP01375 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TNFP01375 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.69□□□□□ -1.66
TNFP01375 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TNFP01375 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
TNFP01375 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
TNFP01375 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.69□□□□□ -1.66
TNFP01375 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms