Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RBMY2TP-201ENST00000451162 947 ntBASIC5.14□□□□□ -1.59
LDLRP01130 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.14□□□□□ -1.59
LDLRP01130 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.14□□□□□ -1.59
LDLRP01130 RPS3AP15-201ENST00000483874 781 ntBASIC5.14□□□□□ -1.59
LDLRP01130 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.14□□□□□ -1.59
LDLRP01130 MTCO1P31-201ENST00000506355 492 ntBASIC5.14□□□□□ -1.59
LDLRP01130 PGAM1P13-201ENST00000507497 754 ntBASIC5.14□□□□□ -1.59
LDLRP01130 OR51K1P-201ENST00000510214 950 ntBASIC5.14□□□□□ -1.59
LDLRP01130 SCARNA20.4-201ENST00000516969 131 ntBASIC5.14□□□□□ -1.59
LDLRP01130 HMGB1P46-201ENST00000520062 610 ntBASIC5.14□□□□□ -1.59
LDLRP01130 AC100784.1-201ENST00000522790 310 ntBASIC5.14□□□□□ -1.59
LDLRP01130 AP000676.2-201ENST00000529711 301 ntBASIC5.14□□□□□ -1.59
LDLRP01130 CR383656.6-201ENST00000550518 394 ntBASIC5.14□□□□□ -1.59
LDLRP01130 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LDLRP01130 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.14□□□□□ -1.59
LDLRP01130 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.14□□□□□ -1.59
LDLRP01130 MIR4436B2-201ENST00000581415 91 ntBASIC5.14□□□□□ -1.59
LDLRP01130 MIR4472-2-201ENST00000582069 67 ntBASIC5.14□□□□□ -1.59
LDLRP01130 MIR4436B1-201ENST00000583272 91 ntBASIC5.14□□□□□ -1.59
LDLRP01130 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.14□□□□□ -1.59
LDLRP01130 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.14□□□□□ -1.59
LDLRP01130 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.14□□□□□ -1.59
LDLRP01130 AC133644.2-201ENST00000608142 540 ntBASIC5.14□□□□□ -1.59
LDLRP01130 AL159169.2-201ENST00000610061 1269 ntBASIC5.14□□□□□ -1.59
LDLRP01130 AC100827.5-201ENST00000615883 426 ntBASIC5.14□□□□□ -1.59
LDLRP01130 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.14□□□□□ -1.59
LDLRP01130 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LDLRP01130 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.14□□□□□ -1.59
LDLRP01130 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LDLRP01130 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.14□□□□□ -1.59
LDLRP01130 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LDLRP01130 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
LDLRP01130 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.14□□□□□ -1.59
LDLRP01130 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LDLRP01130 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LDLRP01130 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.14□□□□□ -1.59
LDLRP01130 AC114947.2-201ENST00000565748 2125 ntBASIC5.14□□□□□ -1.59
LDLRP01130 AC004817.4-201ENST00000602396 3625 ntBASIC5.14□□□□□ -1.59
LDLRP01130 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
LDLRP01130 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.13□□□□□ -1.59
LDLRP01130 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
LDLRP01130 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LDLRP01130 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LDLRP01130 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LDLRP01130 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
LDLRP01130 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LDLRP01130 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LDLRP01130 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LDLRP01130 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LDLRP01130 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LDLRP01130 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LDLRP01130 AC017079.1-201ENST00000333650 415 ntBASIC5.13□□□□□ -1.59
LDLRP01130 AL159987.1-201ENST00000347911 293 ntBASIC5.13□□□□□ -1.59
LDLRP01130 SNORD115-48-201ENST00000364764 76 ntBASIC5.13□□□□□ -1.59
LDLRP01130 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LDLRP01130 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LDLRP01130 AL672167.2-201ENST00000377164 879 ntBASIC5.13□□□□□ -1.59
LDLRP01130 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LDLRP01130 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LDLRP01130 RPL10P10-201ENST00000403509 664 ntBASIC5.13□□□□□ -1.59
LDLRP01130 GAPDHP42-201ENST00000406848 981 ntBASIC5.13□□□□□ -1.59
LDLRP01130 RN7SKP199-201ENST00000410325 305 ntBASIC5.13□□□□□ -1.59
LDLRP01130 AL807761.1-201ENST00000417622 171 ntBASIC5.13□□□□□ -1.59
LDLRP01130 AL133173.1-201ENST00000423458 397 ntBASIC5.13□□□□□ -1.59
LDLRP01130 AC007563.3-201ENST00000433233 371 ntBASIC5.13□□□□□ -1.59
LDLRP01130 AC090018.1-201ENST00000434369 367 ntBASIC5.13□□□□□ -1.59
LDLRP01130 PSMD10P3-201ENST00000437000 448 ntBASIC5.13□□□□□ -1.59
LDLRP01130 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LDLRP01130 FAR2P1-206ENST00000449736 709 ntBASIC5.13□□□□□ -1.59
LDLRP01130 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.13□□□□□ -1.59
LDLRP01130 HIGD1AP8-201ENST00000453927 274 ntBASIC5.13□□□□□ -1.59
LDLRP01130 RPL32P33-201ENST00000487023 394 ntBASIC5.13□□□□□ -1.59
LDLRP01130 RPS12P31-201ENST00000491419 398 ntBASIC5.13□□□□□ -1.59
LDLRP01130 AC009120.1-201ENST00000493458 473 ntBASIC5.13□□□□□ -1.59
LDLRP01130 OR9N1P-202ENST00000494289 481 ntBASIC5.13□□□□□ -1.59
LDLRP01130 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LDLRP01130 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.13□□□□□ -1.59
LDLRP01130 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.13□□□□□ -1.59
LDLRP01130 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.13□□□□□ -1.59
LDLRP01130 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.13□□□□□ -1.59
LDLRP01130 AC021678.3-201ENST00000517893 476 ntBASIC5.13□□□□□ -1.59
LDLRP01130 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.13□□□□□ -1.59
LDLRP01130 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.13□□□□□ -1.59
LDLRP01130 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.13□□□□□ -1.59
LDLRP01130 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.13□□□□□ -1.59
LDLRP01130 AC022832.1-201ENST00000530718 645 ntBASIC5.13□□□□□ -1.59
LDLRP01130 OR8G3P-201ENST00000533406 921 ntBASIC5.13□□□□□ -1.59
LDLRP01130 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.13□□□□□ -1.59
LDLRP01130 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.13□□□□□ -1.59
LDLRP01130 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.13□□□□□ -1.59
LDLRP01130 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.13□□□□□ -1.59
LDLRP01130 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.13□□□□□ -1.59
LDLRP01130 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.13□□□□□ -1.59
LDLRP01130 AC011458.1-201ENST00000604034 617 ntBASIC5.13□□□□□ -1.59
LDLRP01130 BNIP3P19-201ENST00000605397 577 ntBASIC5.13□□□□□ -1.59
LDLRP01130 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.13□□□□□ -1.59
LDLRP01130 AC084824.5-201ENST00000612009 413 ntBASIC5.13□□□□□ -1.59
LDLRP01130 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.13□□□□□ -1.59
LDLRP01130 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
LDLRP01130 SAMMSON-209ENST00000641222 1100 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms