Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC104118.1-201ENST00000607625 1589 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFBP01127 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFBP01127 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFBP01127 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFBP01127 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PDGFBP01127 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PDGFBP01127 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDGFBP01127 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFBP01127 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFBP01127 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFBP01127 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
PDGFBP01127 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFBP01127 RNU4-23P-201ENST00000362839 140 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 SNORD1C-201ENST00000363315 78 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 RNU6-1251P-201ENST00000364502 107 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 RNU1-59P-201ENST00000364829 162 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.19□□□□□ -1.58
PDGFBP01127 RNU11-201ENST00000387069 134 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 SNORD65-201ENST00000391079 73 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 AC025750.1-201ENST00000399891 379 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.19□□□□□ -1.58
PDGFBP01127 AF186996.5-201ENST00000418098 904 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 RFESDP1-201ENST00000422350 461 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.19□□□□□ -1.58
PDGFBP01127 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.19□□□□□ -1.58
PDGFBP01127 UBE2V2P3-201ENST00000433562 437 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 AC093414.1-201ENST00000434712 514 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.19□□□□□ -1.58
PDGFBP01127 BX679664.2-201ENST00000439282 283 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.19□□□□□ -1.58
PDGFBP01127 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.19□□□□□ -1.58
PDGFBP01127 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.19□□□□□ -1.58
PDGFBP01127 AC034236.1-201ENST00000469891 373 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFBP01127 snoU109.5-201ENST00000516231 132 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.19□□□□□ -1.58
PDGFBP01127 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PDGFBP01127 AC084759.1-201ENST00000561168 290 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.19□□□□□ -1.58
PDGFBP01127 AL360012.1-201ENST00000602813 131 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 GMCL1P2-201ENST00000605230 823 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 AC019131.2-201ENST00000609071 870 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 U1.25-201ENST00000614085 162 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 U1.31-201ENST00000620022 160 ntBASIC5.19□□□□□ -1.58
PDGFBP01127 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.19□□□□□ -1.58
PDGFBP01127 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.19□□□□□ -1.58
PDGFBP01127 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.19□□□□□ -1.58
PDGFBP01127 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFBP01127 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.19□□□□□ -1.58
PDGFBP01127 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PDGFBP01127 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.19□□□□□ -1.58
PDGFBP01127 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
PDGFBP01127 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.19□□□□□ -1.58
PDGFBP01127 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFBP01127 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.19□□□□□ -1.58
PDGFBP01127 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
PDGFBP01127 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDGFBP01127 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFBP01127 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFBP01127 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFBP01127 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PDGFBP01127 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 TRIM51GP-201ENST00000534741 1350 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.18□□□□□ -1.58
PDGFBP01127 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.18□□□□□ -1.58
PDGFBP01127 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.18□□□□□ -1.58
PDGFBP01127 AC019072.1-201ENST00000604535 1551 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.18□□□□□ -1.58
PDGFBP01127 Z97832.1-201ENST00000402490 328 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 AL136131.1-201ENST00000406079 803 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 AL139039.2-201ENST00000407436 479 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.18□□□□□ -1.58
PDGFBP01127 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.18□□□□□ -1.58
PDGFBP01127 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.18□□□□□ -1.58
PDGFBP01127 RPL23AP1-201ENST00000428990 471 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.18□□□□□ -1.58
PDGFBP01127 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.18□□□□□ -1.58
PDGFBP01127 BUD31P2-201ENST00000449374 300 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.18□□□□□ -1.58
PDGFBP01127 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 AC010350.1-201ENST00000504908 231 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.18□□□□□ -1.58
PDGFBP01127 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.18□□□□□ -1.58
PDGFBP01127 OR4A17P-201ENST00000526032 904 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.18□□□□□ -1.58
PDGFBP01127 OR8X1P-201ENST00000534542 869 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 NMNAT1P1-201ENST00000554095 876 ntBASIC5.18□□□□□ -1.58
PDGFBP01127 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.18□□□□□ -1.58
PDGFBP01127 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFBP01127 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.18□□□□□ -1.58
PDGFBP01127 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms