Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 OR9N1P-202ENST00000494289 481 ntBASIC4.9□□□□□ -1.63
SNX3O60493 AC104971.1-201ENST00000495117 578 ntBASIC4.9□□□□□ -1.63
SNX3O60493 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.9□□□□□ -1.63
SNX3O60493 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.9□□□□□ -1.63
SNX3O60493 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.9□□□□□ -1.63
SNX3O60493 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.9□□□□□ -1.63
SNX3O60493 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SNX3O60493 NOP56P3-201ENST00000549457 385 ntBASIC4.9□□□□□ -1.63
SNX3O60493 AC087888.1-201ENST00000550884 1254 ntBASIC4.9□□□□□ -1.63
SNX3O60493 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.9□□□□□ -1.63
SNX3O60493 AC005479.3-201ENST00000602790 431 ntBASIC4.9□□□□□ -1.63
SNX3O60493 MTCO3P22-201ENST00000603219 784 ntBASIC4.9□□□□□ -1.63
SNX3O60493 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.9□□□□□ -1.63
SNX3O60493 AC135803.1-201ENST00000608748 565 ntBASIC4.9□□□□□ -1.63
SNX3O60493 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.9□□□□□ -1.63
SNX3O60493 AL512506.1-201ENST00000613918 449 ntBASIC4.9□□□□□ -1.63
SNX3O60493 RPSAP73-201ENST00000614820 330 ntBASIC4.9□□□□□ -1.63
SNX3O60493 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.9□□□□□ -1.63
SNX3O60493 AC015804.1-201ENST00000622935 435 ntBASIC4.9□□□□□ -1.63
SNX3O60493 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.9□□□□□ -1.63
SNX3O60493 AC135068.12-201ENST00000637370 931 ntBASIC4.9□□□□□ -1.63
SNX3O60493 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
SNX3O60493 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SNX3O60493 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SNX3O60493 SCN1A-220ENST00000641603 12506 ntBASIC4.9□□□□□ -1.63
SNX3O60493 ECM1P2-201ENST00000503354 1577 ntBASIC4.9□□□□□ -1.63
SNX3O60493 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SNX3O60493 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SNX3O60493 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SNX3O60493 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SNX3O60493 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SNX3O60493 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SNX3O60493 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SNX3O60493 AC139713.2-215ENST00000641428 5037 ntBASIC4.89□□□□□ -1.63
SNX3O60493 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNX3O60493 LINC01109-201ENST00000603837 3081 ntBASIC4.89□□□□□ -1.63
SNX3O60493 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNX3O60493 MTCO1P7-201ENST00000419523 1542 ntBASIC4.89□□□□□ -1.63
SNX3O60493 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX3O60493 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNX3O60493 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.89□□□□□ -1.63
SNX3O60493 RN7SKP86-201ENST00000410454 332 ntBASIC4.89□□□□□ -1.63
SNX3O60493 RPL26P37-201ENST00000411983 438 ntBASIC4.89□□□□□ -1.63
SNX3O60493 EI24P4-201ENST00000423683 1078 ntBASIC4.89□□□□□ -1.63
SNX3O60493 HMGB3P10-201ENST00000434734 572 ntBASIC4.89□□□□□ -1.63
SNX3O60493 RPS29P9-201ENST00000440360 171 ntBASIC4.89□□□□□ -1.63
SNX3O60493 AC093166.3-201ENST00000448785 303 ntBASIC4.89□□□□□ -1.63
SNX3O60493 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX3O60493 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX3O60493 CABYRP1-201ENST00000465493 1045 ntBASIC4.89□□□□□ -1.63
SNX3O60493 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX3O60493 AC093663.2-201ENST00000484625 313 ntBASIC4.89□□□□□ -1.63
SNX3O60493 MTND3P24-201ENST00000506306 329 ntBASIC4.89□□□□□ -1.63
SNX3O60493 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX3O60493 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.89□□□□□ -1.63
SNX3O60493 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.89□□□□□ -1.63
SNX3O60493 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.89□□□□□ -1.63
SNX3O60493 GLRXP2-201ENST00000555594 321 ntBASIC4.89□□□□□ -1.63
SNX3O60493 AC092121.1-201ENST00000569452 202 ntBASIC4.89□□□□□ -1.63
SNX3O60493 AC005242.1-201ENST00000585658 438 ntBASIC4.89□□□□□ -1.63
SNX3O60493 AL671309.1-201ENST00000603750 544 ntBASIC4.89□□□□□ -1.63
SNX3O60493 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX3O60493 AL135786.2-201ENST00000608422 615 ntBASIC4.89□□□□□ -1.63
SNX3O60493 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNX3O60493 HTR1DP1-201ENST00000616500 888 ntBASIC4.89□□□□□ -1.63
SNX3O60493 AP006248.3-201ENST00000623580 594 ntBASIC4.89□□□□□ -1.63
SNX3O60493 SOCS5P3-201ENST00000425115 1576 ntBASIC4.89□□□□□ -1.63
SNX3O60493 CASC19-281ENST00000642118 1554 ntBASIC4.89□□□□□ -1.63
SNX3O60493 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNX3O60493 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNX3O60493 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.89□□□□□ -1.63
SNX3O60493 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SNX3O60493 AC026523.2-201ENST00000625039 7739 ntBASIC4.89□□□□□ -1.63
SNX3O60493 OR51H2P-202ENST00000641424 3046 ntBASIC4.89□□□□□ -1.63
SNX3O60493 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX3O60493 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX3O60493 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX3O60493 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
SNX3O60493 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SNX3O60493 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX3O60493 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SNX3O60493 AC120338.1-201ENST00000625074 1541 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AP001002.1-201ENST00000625148 1513 ntBASIC4.88□□□□□ -1.63
SNX3O60493 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX3O60493 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
SNX3O60493 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX3O60493 RNA5SP28-201ENST00000363841 119 ntBASIC4.88□□□□□ -1.63
SNX3O60493 RN7SKP250-201ENST00000363924 321 ntBASIC4.88□□□□□ -1.63
SNX3O60493 RNU4-7P-201ENST00000364758 141 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX3O60493 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.88□□□□□ -1.63
SNX3O60493 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX3O60493 AL590806.1-201ENST00000415818 853 ntBASIC4.88□□□□□ -1.63
SNX3O60493 RPA2P2-201ENST00000419698 796 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX3O60493 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX3O60493 RPS4XP16-201ENST00000427198 791 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNX3O60493 AC005033.1-201ENST00000428904 813 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AC023141.6-201ENST00000429418 337 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms