Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.86□□□□□ -1.63
ZIC3O60481 TPTE2P3-201ENST00000441562 1189 ntBASIC4.86□□□□□ -1.63
ZIC3O60481 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.86□□□□□ -1.63
ZIC3O60481 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.86□□□□□ -1.63
ZIC3O60481 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.86□□□□□ -1.63
ZIC3O60481 RN7SL197P-201ENST00000466981 299 ntBASIC4.86□□□□□ -1.63
ZIC3O60481 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ZIC3O60481 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ZIC3O60481 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ZIC3O60481 RNU6-276P-201ENST00000516114 96 ntBASIC4.86□□□□□ -1.63
ZIC3O60481 Y_RNA.717-201ENST00000517106 92 ntBASIC4.86□□□□□ -1.63
ZIC3O60481 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ZIC3O60481 HIGD1AP18-201ENST00000520730 278 ntBASIC4.86□□□□□ -1.63
ZIC3O60481 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.86□□□□□ -1.63
ZIC3O60481 OR8G5-201ENST00000524943 1041 ntBASIC4.86□□□□□ -1.63
ZIC3O60481 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ZIC3O60481 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.86□□□□□ -1.63
ZIC3O60481 YWHABP2-201ENST00000540201 713 ntBASIC4.86□□□□□ -1.63
ZIC3O60481 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.86□□□□□ -1.63
ZIC3O60481 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.86□□□□□ -1.63
ZIC3O60481 AL049830.4-201ENST00000555149 351 ntBASIC4.86□□□□□ -1.63
ZIC3O60481 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.86□□□□□ -1.63
ZIC3O60481 RPL10P14-201ENST00000565265 298 ntBASIC4.86□□□□□ -1.63
ZIC3O60481 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.86□□□□□ -1.63
ZIC3O60481 RN7SL356P-201ENST00000582228 248 ntBASIC4.86□□□□□ -1.63
ZIC3O60481 RN7SL622P-201ENST00000585292 275 ntBASIC4.86□□□□□ -1.63
ZIC3O60481 AP002884.5-201ENST00000595053 1132 ntBASIC4.86□□□□□ -1.63
ZIC3O60481 AC006946.3-201ENST00000609791 756 ntBASIC4.86□□□□□ -1.63
ZIC3O60481 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.86□□□□□ -1.63
ZIC3O60481 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.86□□□□□ -1.63
ZIC3O60481 AC074101.1-201ENST00000637861 241 ntBASIC4.86□□□□□ -1.63
ZIC3O60481 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.86□□□□□ -1.63
ZIC3O60481 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.86□□□□□ -1.63
ZIC3O60481 AC020633.1-201ENST00000468439 2247 ntBASIC4.86□□□□□ -1.63
ZIC3O60481 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
ZIC3O60481 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.86□□□□□ -1.63
ZIC3O60481 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
ZIC3O60481 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ZIC3O60481 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.86□□□□□ -1.63
ZIC3O60481 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.86□□□□□ -1.63
ZIC3O60481 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
ZIC3O60481 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ZIC3O60481 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ZIC3O60481 AL360270.2-201ENST00000562952 5985 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ZIC3O60481 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZIC3O60481 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.85□□□□□ -1.63
ZIC3O60481 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ZIC3O60481 ZNF29P-201ENST00000225587 168 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 AC005294.1-201ENST00000355509 281 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ZIC3O60481 ANAPC10P1-201ENST00000395991 556 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.85□□□□□ -1.63
ZIC3O60481 AC093655.2-201ENST00000425735 631 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 RPL23AP4-201ENST00000427757 463 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.85□□□□□ -1.63
ZIC3O60481 OR52B5P-201ENST00000435337 951 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.85□□□□□ -1.63
ZIC3O60481 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ZIC3O60481 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ZIC3O60481 TPT1P1-201ENST00000458495 518 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 AC074386.1-201ENST00000476560 767 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 RPL7P6-201ENST00000480903 738 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 RN7SL30P-201ENST00000488416 306 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 RPS4XP14-201ENST00000493072 781 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.85□□□□□ -1.63
ZIC3O60481 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.85□□□□□ -1.63
ZIC3O60481 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.85□□□□□ -1.63
ZIC3O60481 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.85□□□□□ -1.63
ZIC3O60481 HPRT1P1-201ENST00000509498 657 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 RNA5SP34-201ENST00000516887 130 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 AC091163.3-201ENST00000518269 1144 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.85□□□□□ -1.63
ZIC3O60481 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.85□□□□□ -1.63
ZIC3O60481 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.85□□□□□ -1.63
ZIC3O60481 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.85□□□□□ -1.63
ZIC3O60481 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.85□□□□□ -1.63
ZIC3O60481 CYB5AP5-201ENST00000549779 389 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.85□□□□□ -1.63
ZIC3O60481 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.85□□□□□ -1.63
ZIC3O60481 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.85□□□□□ -1.63
ZIC3O60481 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.85□□□□□ -1.63
ZIC3O60481 AC244107.2-201ENST00000611773 76 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 AP004607.9-201ENST00000618202 316 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 AC008115.4-201ENST00000619780 775 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 AP003400.3-201ENST00000624904 346 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 OR52B5P-202ENST00000641118 1110 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 AC017007.4-201ENST00000503353 1352 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.85□□□□□ -1.63
ZIC3O60481 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ZIC3O60481 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZIC3O60481 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ZIC3O60481 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.85□□□□□ -1.63
ZIC3O60481 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZIC3O60481 PABPC1P6-201ENST00000445594 1829 ntBASIC4.85□□□□□ -1.63
ZIC3O60481 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZIC3O60481 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ZIC3O60481 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ZIC3O60481 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.85□□□□□ -1.63
ZIC3O60481 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms