Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC092647.2-201ENST00000452998 253 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 AC019084.1-201ENST00000457337 432 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 AC094085.1-201ENST00000468914 584 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 RPS26P28-201ENST00000470806 348 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 RN7SL319P-201ENST00000480656 221 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.81□□□□□ -1.8
SSSCA1O60232 RN7SL184P-201ENST00000488308 297 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSSCA1O60232 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.81□□□□□ -1.8
SSSCA1O60232 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC3.81□□□□□ -1.8
SSSCA1O60232 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.81□□□□□ -1.8
SSSCA1O60232 BMPR1APS2-201ENST00000527904 1012 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.81□□□□□ -1.8
SSSCA1O60232 AL049779.2-201ENST00000553847 315 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 MTND6P33-201ENST00000571794 183 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 AC091178.1-203ENST00000584586 279 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC3.81□□□□□ -1.8
SSSCA1O60232 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC3.81□□□□□ -1.8
SSSCA1O60232 HMGB2P1-201ENST00000591146 634 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.81□□□□□ -1.8
SSSCA1O60232 RNU6-84P-201ENST00000607737 102 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC3.81□□□□□ -1.8
SSSCA1O60232 AL356752.1-201ENST00000615844 593 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSSCA1O60232 REV3L-214ENST00000619481 969 ntTSL 5 BASIC3.81□□□□□ -1.8
SSSCA1O60232 AP002505.2-201ENST00000623585 696 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSSCA1O60232 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSSCA1O60232 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.81□□□□□ -1.8
SSSCA1O60232 CDC27P2-201ENST00000425026 1922 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSSCA1O60232 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.81□□□□□ -1.8
SSSCA1O60232 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSSCA1O60232 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSSCA1O60232 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSSCA1O60232 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.81□□□□□ -1.8
SSSCA1O60232 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SSSCA1O60232 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSSCA1O60232 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
SSSCA1O60232 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
SSSCA1O60232 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.8□□□□□ -1.8
SSSCA1O60232 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSSCA1O60232 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSSCA1O60232 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSSCA1O60232 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSSCA1O60232 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSSCA1O60232 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSSCA1O60232 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSSCA1O60232 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSSCA1O60232 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.8□□□□□ -1.8
SSSCA1O60232 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SSSCA1O60232 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.8□□□□□ -1.8
SSSCA1O60232 U3.2-201ENST00000362981 210 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 RN7SKP187-201ENST00000365536 330 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSSCA1O60232 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
SSSCA1O60232 Z97832.1-201ENST00000402490 328 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 RN7SKP216-201ENST00000411050 312 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 RPL35AP24-201ENST00000413846 330 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.8□□□□□ -1.8
SSSCA1O60232 RPL21P43-201ENST00000425440 472 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 AP000281.1-201ENST00000444036 316 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 HMGN1P2-201ENST00000445197 310 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSSCA1O60232 NDUFA5P8-201ENST00000449019 346 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 RPS6P2-201ENST00000454208 705 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 AC097484.1-201ENST00000471148 389 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.8□□□□□ -1.8
SSSCA1O60232 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 IGLV3-26-201ENST00000520756 302 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.8□□□□□ -1.8
SSSCA1O60232 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC3.8□□□□□ -1.8
SSSCA1O60232 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.8□□□□□ -1.8
SSSCA1O60232 RPL7P50-201ENST00000600588 727 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 RNA5SP440-201ENST00000612665 119 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 AL353726.1-201ENST00000614041 1000 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 AL359513.1-201ENST00000614364 557 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 AC007204.2-201ENST00000615022 616 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 AC009237.17-201ENST00000618111 748 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.8□□□□□ -1.8
SSSCA1O60232 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.8□□□□□ -1.8
SSSCA1O60232 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.8□□□□□ -1.8
SSSCA1O60232 AC138627.1-204ENST00000641894 765 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 KARSP1-201ENST00000451871 1752 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
SSSCA1O60232 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSSCA1O60232 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SSSCA1O60232 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSSCA1O60232 SMG1P6-201ENST00000532337 2930 ntBASIC3.8□□□□□ -1.8
SSSCA1O60232 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SSSCA1O60232 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSSCA1O60232 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSSCA1O60232 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SSSCA1O60232 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSSCA1O60232 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.79□□□□□ -1.8
SSSCA1O60232 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SSSCA1O60232 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SSSCA1O60232 TMSB4XP4-201ENST00000323496 618 ntBASIC3.79□□□□□ -1.8
SSSCA1O60232 SNORA70-201ENST00000384436 135 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms