Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSX4O60224 RPS17P15-201ENST00000475609 349 ntBASIC4.89□□□□□ -1.63
SSX4O60224 AC087672.1-201ENST00000479876 766 ntBASIC4.89□□□□□ -1.63
SSX4O60224 RPL32P33-201ENST00000487023 394 ntBASIC4.89□□□□□ -1.63
SSX4O60224 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX4O60224 HAUS1P1-201ENST00000505275 832 ntBASIC4.89□□□□□ -1.63
SSX4O60224 IMPA1P1-201ENST00000510718 842 ntBASIC4.89□□□□□ -1.63
SSX4O60224 AC016559.2-201ENST00000510759 359 ntBASIC4.89□□□□□ -1.63
SSX4O60224 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.89□□□□□ -1.63
SSX4O60224 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX4O60224 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX4O60224 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX4O60224 SOX5P1-201ENST00000524155 1127 ntBASIC4.89□□□□□ -1.63
SSX4O60224 AP003102.1-201ENST00000525638 661 ntBASIC4.89□□□□□ -1.63
SSX4O60224 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.89□□□□□ -1.63
SSX4O60224 AL049870.4-201ENST00000555741 486 ntBASIC4.89□□□□□ -1.63
SSX4O60224 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX4O60224 DHFRP1-201ENST00000579682 559 ntBASIC4.89□□□□□ -1.63
SSX4O60224 AC009237.13-201ENST00000603193 276 ntBASIC4.89□□□□□ -1.63
SSX4O60224 AC108738.1-201ENST00000603703 237 ntBASIC4.89□□□□□ -1.63
SSX4O60224 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSX4O60224 AP000943.4-201ENST00000622912 357 ntBASIC4.89□□□□□ -1.63
SSX4O60224 AC022919.1-201ENST00000624979 626 ntBASIC4.89□□□□□ -1.63
SSX4O60224 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.89□□□□□ -1.63
SSX4O60224 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SSX4O60224 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSX4O60224 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSX4O60224 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
SSX4O60224 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSX4O60224 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SSX4O60224 TRIM51GP-201ENST00000534741 1350 ntBASIC4.89□□□□□ -1.63
SSX4O60224 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSX4O60224 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX4O60224 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SSX4O60224 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX4O60224 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX4O60224 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX4O60224 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSX4O60224 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.88□□□□□ -1.63
SSX4O60224 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.88□□□□□ -1.63
SSX4O60224 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX4O60224 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SSX4O60224 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SSX4O60224 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX4O60224 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SSX4O60224 RNU1-19P-201ENST00000363306 165 ntBASIC4.88□□□□□ -1.63
SSX4O60224 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.88□□□□□ -1.63
SSX4O60224 RNU6-796P-201ENST00000391086 107 ntBASIC4.88□□□□□ -1.63
SSX4O60224 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX4O60224 VN1R21P-201ENST00000426703 765 ntBASIC4.88□□□□□ -1.63
SSX4O60224 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.88□□□□□ -1.63
SSX4O60224 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX4O60224 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.88□□□□□ -1.63
SSX4O60224 AL390119.1-201ENST00000440329 312 ntBASIC4.88□□□□□ -1.63
SSX4O60224 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX4O60224 AL450996.1-201ENST00000445574 1202 ntBASIC4.88□□□□□ -1.63
SSX4O60224 AC090804.1-201ENST00000448870 490 ntBASIC4.88□□□□□ -1.63
SSX4O60224 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
SSX4O60224 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.88□□□□□ -1.63
SSX4O60224 OR5M14P-201ENST00000506803 618 ntBASIC4.88□□□□□ -1.63
SSX4O60224 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX4O60224 AL671862.1-201ENST00000515851 349 ntBASIC4.88□□□□□ -1.63
SSX4O60224 AC021678.3-201ENST00000517893 476 ntBASIC4.88□□□□□ -1.63
SSX4O60224 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
SSX4O60224 CIR1P1-201ENST00000524055 1133 ntBASIC4.88□□□□□ -1.63
SSX4O60224 C1DP5-201ENST00000525775 383 ntBASIC4.88□□□□□ -1.63
SSX4O60224 OR8A2P-201ENST00000528631 952 ntBASIC4.88□□□□□ -1.63
SSX4O60224 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSX4O60224 AC122688.1-201ENST00000541494 223 ntBASIC4.88□□□□□ -1.63
SSX4O60224 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.88□□□□□ -1.63
SSX4O60224 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX4O60224 AL390334.1-201ENST00000556395 450 ntBASIC4.88□□□□□ -1.63
SSX4O60224 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.88□□□□□ -1.63
SSX4O60224 RBM22P12-201ENST00000567098 1255 ntBASIC4.88□□□□□ -1.63
SSX4O60224 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.88□□□□□ -1.63
SSX4O60224 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX4O60224 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX4O60224 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX4O60224 AC110792.4-201ENST00000609843 298 ntBASIC4.88□□□□□ -1.63
SSX4O60224 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.88□□□□□ -1.63
SSX4O60224 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX4O60224 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSX4O60224 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX4O60224 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX4O60224 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX4O60224 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX4O60224 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.88□□□□□ -1.63
SSX4O60224 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSX4O60224 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX4O60224 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX4O60224 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SSX4O60224 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.88□□□□□ -1.63
SSX4O60224 PCAT14-202ENST00000627127 3935 ntBASIC4.88□□□□□ -1.63
SSX4O60224 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX4O60224 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.87□□□□□ -1.63
SSX4O60224 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX4O60224 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.87□□□□□ -1.63
SSX4O60224 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SSX4O60224 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.87□□□□□ -1.63
SSX4O60224 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms