Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN3O15551 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN3O15551 AC104333.2-201ENST00000422630 192 ntBASIC5.39□□□□□ -1.55
CLDN3O15551 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.39□□□□□ -1.55
CLDN3O15551 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.39□□□□□ -1.55
CLDN3O15551 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.39□□□□□ -1.55
CLDN3O15551 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN3O15551 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN3O15551 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.39□□□□□ -1.55
CLDN3O15551 GAPDHP56-201ENST00000506031 988 ntBASIC5.39□□□□□ -1.55
CLDN3O15551 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN3O15551 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN3O15551 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
CLDN3O15551 AC087385.3-201ENST00000620477 187 ntBASIC5.39□□□□□ -1.55
CLDN3O15551 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN3O15551 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CLDN3O15551 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN3O15551 AC008079.2-201ENST00000623543 20396 ntBASIC5.39□□□□□ -1.55
CLDN3O15551 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.39□□□□□ -1.55
CLDN3O15551 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN3O15551 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN3O15551 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.38□□□□□ -1.55
CLDN3O15551 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
CLDN3O15551 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN3O15551 RN7SKP149-201ENST00000363008 344 ntBASIC5.38□□□□□ -1.55
CLDN3O15551 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CLDN3O15551 HMGB3P7-201ENST00000400214 611 ntBASIC5.38□□□□□ -1.55
CLDN3O15551 GTF2IP5-201ENST00000414608 731 ntBASIC5.38□□□□□ -1.55
CLDN3O15551 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN3O15551 QRSL1P2-201ENST00000418582 964 ntBASIC5.38□□□□□ -1.55
CLDN3O15551 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN3O15551 SCAND3P1-201ENST00000439854 1060 ntBASIC5.38□□□□□ -1.55
CLDN3O15551 RPS3AP53-201ENST00000454716 778 ntBASIC5.38□□□□□ -1.55
CLDN3O15551 AC093166.2-201ENST00000455969 1017 ntBASIC5.38□□□□□ -1.55
CLDN3O15551 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN3O15551 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN3O15551 AC116562.1-201ENST00000485355 781 ntBASIC5.38□□□□□ -1.55
CLDN3O15551 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN3O15551 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.38□□□□□ -1.55
CLDN3O15551 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN3O15551 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.38□□□□□ -1.55
CLDN3O15551 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN3O15551 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.38□□□□□ -1.55
CLDN3O15551 AP000859.1-201ENST00000525536 307 ntBASIC5.38□□□□□ -1.55
CLDN3O15551 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN3O15551 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN3O15551 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.38□□□□□ -1.55
CLDN3O15551 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.38□□□□□ -1.55
CLDN3O15551 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN3O15551 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN3O15551 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.38□□□□□ -1.55
CLDN3O15551 AC104687.2-201ENST00000604442 342 ntBASIC5.38□□□□□ -1.55
CLDN3O15551 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN3O15551 OR7M1P-201ENST00000608946 533 ntBASIC5.38□□□□□ -1.55
CLDN3O15551 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.38□□□□□ -1.55
CLDN3O15551 AL049539.1-201ENST00000611964 459 ntBASIC5.38□□□□□ -1.55
CLDN3O15551 AC074140.1-201ENST00000621617 208 ntBASIC5.38□□□□□ -1.55
CLDN3O15551 AC243960.7-201ENST00000623532 707 ntBASIC5.38□□□□□ -1.55
CLDN3O15551 AP000648.2-201ENST00000624182 404 ntBASIC5.38□□□□□ -1.55
CLDN3O15551 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN3O15551 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN3O15551 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN3O15551 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN3O15551 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN3O15551 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.38□□□□□ -1.55
CLDN3O15551 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN3O15551 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN3O15551 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN3O15551 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN3O15551 AC011447.7-201ENST00000624228 1590 ntBASIC5.38□□□□□ -1.55
CLDN3O15551 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN3O15551 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN3O15551 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN3O15551 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDN3O15551 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN3O15551 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN3O15551 AC013442.1-201ENST00000397347 228 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN3O15551 AC104837.2-201ENST00000427236 424 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 AC093414.1-201ENST00000434712 514 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN3O15551 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN3O15551 AL138787.1-202ENST00000437804 898 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 AC073052.1-201ENST00000440417 714 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 AL157385.1-201ENST00000446973 268 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN3O15551 MRPL35P2-201ENST00000448009 511 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 SLC25A18P1-201ENST00000449385 454 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 OR52J1P-201ENST00000450596 932 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN3O15551 RPL23AP56-201ENST00000460778 453 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 CCNHP1-201ENST00000513311 678 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN3O15551 AC105031.1-201ENST00000518550 476 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 AP006245.2-201ENST00000522004 300 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN3O15551 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN3O15551 AC009117.1-201ENST00000563948 554 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 BGLT3-201ENST00000564523 994 ntBASIC5.37□□□□□ -1.55
CLDN3O15551 AC020910.3-201ENST00000603701 874 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms