Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.38□□□□□ -1.55
O00370 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.38□□□□□ -1.55
O00370 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.38□□□□□ -1.55
O00370 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.38□□□□□ -1.55
O00370 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.38□□□□□ -1.55
O00370 AC105254.2-201ENST00000603636 436 ntBASIC5.38□□□□□ -1.55
O00370 AC022387.2-201ENST00000604050 448 ntBASIC5.38□□□□□ -1.55
O00370 AC015871.5-202ENST00000623252 701 ntBASIC5.38□□□□□ -1.55
O00370 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.38□□□□□ -1.55
O00370 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.38□□□□□ -1.55
O00370 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
O00370 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
O00370 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
O00370 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
O00370 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.38□□□□□ -1.55
O00370 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
O00370 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
O00370 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.37□□□□□ -1.55
O00370 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
O00370 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.37□□□□□ -1.55
O00370 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
O00370 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
O00370 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
O00370 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
O00370 AC104297.1-201ENST00000393779 870 ntBASIC5.37□□□□□ -1.55
O00370 RN7SKP278-201ENST00000410504 342 ntBASIC5.37□□□□□ -1.55
O00370 OR5M12P-201ENST00000423388 929 ntBASIC5.37□□□□□ -1.55
O00370 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
O00370 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.37□□□□□ -1.55
O00370 Z85994.2-201ENST00000434327 452 ntBASIC5.37□□□□□ -1.55
O00370 LYPLA1P1-201ENST00000434514 622 ntBASIC5.37□□□□□ -1.55
O00370 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.37□□□□□ -1.55
O00370 RPS29P9-201ENST00000440360 171 ntBASIC5.37□□□□□ -1.55
O00370 AC114878.1-201ENST00000441166 358 ntBASIC5.37□□□□□ -1.55
O00370 BTF3P6-201ENST00000448054 499 ntBASIC5.37□□□□□ -1.55
O00370 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.37□□□□□ -1.55
O00370 HSPE1P22-201ENST00000456856 327 ntBASIC5.37□□□□□ -1.55
O00370 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.37□□□□□ -1.55
O00370 OR52A4P-202ENST00000481634 799 ntBASIC5.37□□□□□ -1.55
O00370 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.37□□□□□ -1.55
O00370 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.37□□□□□ -1.55
O00370 AC010350.1-201ENST00000504908 231 ntBASIC5.37□□□□□ -1.55
O00370 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.37□□□□□ -1.55
O00370 HMGB3P16-201ENST00000508037 287 ntBASIC5.37□□□□□ -1.55
O00370 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.37□□□□□ -1.55
O00370 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.37□□□□□ -1.55
O00370 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.37□□□□□ -1.55
O00370 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.37□□□□□ -1.55
O00370 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.37□□□□□ -1.55
O00370 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
O00370 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.37□□□□□ -1.55
O00370 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.37□□□□□ -1.55
O00370 DPRXP4-201ENST00000578053 568 ntBASIC5.37□□□□□ -1.55
O00370 AC233702.9-201ENST00000581528 203 ntBASIC5.37□□□□□ -1.55
O00370 AC011840.5-201ENST00000582125 771 ntBASIC5.37□□□□□ -1.55
O00370 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.37□□□□□ -1.55
O00370 AC245128.3-201ENST00000594721 748 ntBASIC5.37□□□□□ -1.55
O00370 AL354696.1-201ENST00000614652 497 ntBASIC5.37□□□□□ -1.55
O00370 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.37□□□□□ -1.55
O00370 AC104820.1-201ENST00000624183 307 ntBASIC5.37□□□□□ -1.55
O00370 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.37□□□□□ -1.55
O00370 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
O00370 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
O00370 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
O00370 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
O00370 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
O00370 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
O00370 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
O00370 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
O00370 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
O00370 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
O00370 MT-RNR1-201ENST00000389680 954 ntBASIC5.36□□□□□ -1.55
O00370 HMGB3P7-201ENST00000400214 611 ntBASIC5.36□□□□□ -1.55
O00370 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.36□□□□□ -1.55
O00370 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.36□□□□□ -1.55
O00370 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.36□□□□□ -1.55
O00370 BMS1P13-201ENST00000417301 885 ntBASIC5.36□□□□□ -1.55
O00370 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.36□□□□□ -1.55
O00370 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.36□□□□□ -1.55
O00370 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.36□□□□□ -1.55
O00370 AL627308.1-201ENST00000435693 821 ntBASIC5.36□□□□□ -1.55
O00370 AL031584.1-201ENST00000447169 754 ntBASIC5.36□□□□□ -1.55
O00370 AL354714.3-201ENST00000447284 493 ntBASIC5.36□□□□□ -1.55
O00370 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.36□□□□□ -1.55
O00370 IGHV5-78-201ENST00000450948 295 ntBASIC5.36□□□□□ -1.55
O00370 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.36□□□□□ -1.55
O00370 AC026348.1-201ENST00000462549 1053 ntBASIC5.36□□□□□ -1.55
O00370 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.36□□□□□ -1.55
O00370 AC109462.1-201ENST00000491087 368 ntBASIC5.36□□□□□ -1.55
O00370 ATG10-AS1-201ENST00000504846 648 ntBASIC5.36□□□□□ -1.55
O00370 AC004980.4-201ENST00000513375 203 ntBASIC5.36□□□□□ -1.55
O00370 RNA5SP43-201ENST00000516559 110 ntBASIC5.36□□□□□ -1.55
O00370 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
O00370 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.36□□□□□ -1.55
O00370 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.36□□□□□ -1.55
O00370 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.36□□□□□ -1.55
O00370 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.36□□□□□ -1.55
O00370 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
O00370 MIR4691-201ENST00000583764 85 ntBASIC5.36□□□□□ -1.55
O00370 AC006272.2-201ENST00000594725 163 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms