Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PDLIM1O00151 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.89□□□□□ -1.63
PDLIM1O00151 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
PDLIM1O00151 DHX9P1-201ENST00000436565 3076 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 AL672167.1-205ENST00000641112 3080 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM1O00151 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.88□□□□□ -1.63
PDLIM1O00151 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM1O00151 RNU4-2-201ENST00000365668 141 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.88□□□□□ -1.63
PDLIM1O00151 RPS20P25-201ENST00000412447 352 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.88□□□□□ -1.63
PDLIM1O00151 AC079355.1-201ENST00000421770 223 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 RCC2P2-201ENST00000422174 918 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.88□□□□□ -1.63
PDLIM1O00151 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.88□□□□□ -1.63
PDLIM1O00151 GAPDHP58-201ENST00000438477 1006 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.88□□□□□ -1.63
PDLIM1O00151 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.88□□□□□ -1.63
PDLIM1O00151 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.88□□□□□ -1.63
PDLIM1O00151 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.88□□□□□ -1.63
PDLIM1O00151 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.88□□□□□ -1.63
PDLIM1O00151 RPL35AP19-201ENST00000469425 329 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.88□□□□□ -1.63
PDLIM1O00151 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.88□□□□□ -1.63
PDLIM1O00151 EIF1P7-201ENST00000487533 337 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.88□□□□□ -1.63
PDLIM1O00151 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.88□□□□□ -1.63
PDLIM1O00151 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.88□□□□□ -1.63
PDLIM1O00151 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.88□□□□□ -1.63
PDLIM1O00151 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM1O00151 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM1O00151 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.88□□□□□ -1.63
PDLIM1O00151 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PDLIM1O00151 AC018552.1-201ENST00000562099 811 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM1O00151 RN7SL753P-201ENST00000581238 290 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 MIR3176-201ENST00000582210 90 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 AL162431.4-201ENST00000604674 411 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 AC010245.2-201ENST00000606908 1167 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.88□□□□□ -1.63
PDLIM1O00151 AC108359.1-201ENST00000616451 1211 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.88□□□□□ -1.63
PDLIM1O00151 AC132068.1-201ENST00000623805 459 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 AC055839.1-201ENST00000634467 498 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 AL049767.1-202ENST00000637826 242 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM1O00151 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.88□□□□□ -1.63
PDLIM1O00151 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM1O00151 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
PDLIM1O00151 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM1O00151 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.87□□□□□ -1.63
PDLIM1O00151 AC006210.2-201ENST00000367074 1545 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 AL450326.2-201ENST00000421913 1962 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM1O00151 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PDLIM1O00151 AC107021.2-201ENST00000567714 2095 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.87□□□□□ -1.63
PDLIM1O00151 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM1O00151 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM1O00151 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM1O00151 AC005294.1-201ENST00000355509 281 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 RN7SKP160-201ENST00000363804 340 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 OR13C3-201ENST00000374781 1108 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 OR3A2-201ENST00000408891 1076 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 AC013429.2-201ENST00000418798 781 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM1O00151 AC092570.3-201ENST00000420113 693 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 ARAFP1-201ENST00000422172 605 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 FABP7P1-201ENST00000424004 391 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 RPL12P17-201ENST00000432393 498 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 XKRYP6-201ENST00000440468 1116 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 XKRYP3-201ENST00000442113 1116 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.87□□□□□ -1.63
PDLIM1O00151 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.87□□□□□ -1.63
PDLIM1O00151 OR2AF1P-201ENST00000454899 889 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 RANP1-206ENST00000455094 651 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 MTND6P32-201ENST00000457611 483 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.87□□□□□ -1.63
PDLIM1O00151 RPS6P4-201ENST00000494693 758 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.87□□□□□ -1.63
PDLIM1O00151 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.87□□□□□ -1.63
PDLIM1O00151 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.87□□□□□ -1.63
PDLIM1O00151 MTCYBP19-201ENST00000517463 1124 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.87□□□□□ -1.63
PDLIM1O00151 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.87□□□□□ -1.63
PDLIM1O00151 HMGB3P26-201ENST00000560051 582 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.87□□□□□ -1.63
PDLIM1O00151 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.87□□□□□ -1.63
PDLIM1O00151 AC026979.4-201ENST00000606555 645 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.87□□□□□ -1.63
PDLIM1O00151 MIR6886-201ENST00000619864 61 ntBASIC4.87□□□□□ -1.63
PDLIM1O00151 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PDLIM1O00151 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
PDLIM1O00151 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PDLIM1O00151 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.87□□□□□ -1.63
PDLIM1O00151 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.87□□□□□ -1.63
PDLIM1O00151 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM1O00151 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM1O00151 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms