Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC021242.1-201ENST00000507315 2035 ntBASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 RPL36AP10-201ENST00000421785 322 ntBASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 OR52J1P-201ENST00000450596 932 ntBASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL513533.1-201ENST00000453728 415 ntBASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC006967.1-201ENST00000467608 589 ntBASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 RPL7P41-201ENST00000485823 957 ntBASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 MIR3667-201ENST00000581025 74 ntBASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 IRF5P1-201ENST00000504852 2164 ntBASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC132825.1-201ENST00000463573 2247 ntBASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TMX2-CTNND1H3BSU7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 SMG1P4-204ENST00000523028 4131 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 OR9G4-201ENST00000302957 984 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 SNORA48.4-201ENST00000391089 134 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL445213.1-201ENST00000412589 747 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 RBMY2TP-201ENST00000451162 947 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 RPS29P33-201ENST00000456717 146 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 RPS12P31-201ENST00000491419 398 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 RN7SL346P-201ENST00000491561 294 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 HMGB3P16-201ENST00000508037 287 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 RNA5SP43-201ENST00000516559 110 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL390334.1-201ENST00000556395 450 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC079075.1-201ENST00000559543 878 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC233702.9-201ENST00000581528 203 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC105254.2-201ENST00000603636 436 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL391358.1-201ENST00000605342 190 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC019193.2-201ENST00000610012 634 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 uc_338.18-201ENST00000615451 175 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 MIR6839-201ENST00000620425 113 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 MTCO1P1-201ENST00000624263 1081 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC006210.2-201ENST00000367074 1545 ntBASIC4.87□□□□□ -1.63
TMX2-CTNND1H3BSU7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC097461.1-201ENST00000568928 2821 ntBASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 MIR589-201ENST00000385238 99 ntBASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 MIR298-201ENST00000401212 88 ntBASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC119751.6-201ENST00000416712 186 ntBASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.86□□□□□ -1.63
TMX2-CTNND1H3BSU7 RPL34P20-201ENST00000442771 351 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms