Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 AC015912.2-201ENST00000571053 181 ntBASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 MEMO1P5-201ENST00000604810 406 ntBASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 AC008115.4-201ENST00000619780 775 ntBASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 AC140113.4-201ENST00000622087 222 ntBASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 DDX18P4-201ENST00000511690 1966 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 AL136164.3-201ENST00000624429 3978 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 U3.36-201ENST00000408418 213 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 SEPT7P8-201ENST00000413308 775 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 GTF2IP5-201ENST00000414608 731 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 Z74021.1-201ENST00000423610 407 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 AC072052.1-201ENST00000496556 306 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 SNRPCP2-201ENST00000504370 475 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 AC021146.3-201ENST00000511911 260 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 ATP5LP3-201ENST00000514223 304 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 IGKV2-18-201ENST00000522607 343 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 GSTP1P1-201ENST00000548078 319 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 RPL21P7-201ENST00000557463 483 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 ATP5J2P6-201ENST00000565203 266 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 AC209154.1-201ENST00000582156 337 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 MIR3176-201ENST00000582210 90 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 AC004232.3-201ENST00000622977 525 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM49D1C9J1S8 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 IL6STP1-201ENST00000346911 1020 ntBASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 AL445213.1-201ENST00000412589 747 ntBASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 LINC00993-201ENST00000420453 540 ntBASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 AL121578.1-201ENST00000428051 892 ntBASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 ARL4AP3-201ENST00000441452 574 ntBASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 RPS18P6-201ENST00000476880 458 ntBASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 ARL4AP1-201ENST00000503220 705 ntBASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 SCARNA21.2-201ENST00000516600 166 ntBASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 RNU6-84P-201ENST00000607737 102 ntBASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 AL512624.1-201ENST00000613638 469 ntBASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 HSPD1P14-201ENST00000432666 1618 ntBASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM49D1C9J1S8 AC099654.2-201ENST00000433031 1980 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 DDX18P6-201ENST00000450119 1997 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms