Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC022360.1-201ENST00000521058 340 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 YWHABP2-201ENST00000540201 713 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC005341.1-201ENST00000571086 708 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC015911.5-201ENST00000587076 451 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 AL162431.4-201ENST00000604674 411 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 RNA5SP440-201ENST00000612665 119 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC139769.3-201ENST00000618383 175 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 MIR6839-201ENST00000620425 113 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC127024.6-201ENST00000621598 424 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 FRG1EP-201ENST00000634469 770 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SRRM4A7MD48 HSPD1P11-201ENST00000508643 1702 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SRRM4A7MD48 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SRRM4A7MD48 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SRRM4A7MD48 GTF2H2B-203ENST00000508065 1432 ntBASIC4.28□□□□□ -1.72
SRRM4A7MD48 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.28□□□□□ -1.72
SRRM4A7MD48 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SRRM4A7MD48 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SRRM4A7MD48 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRRM4A7MD48 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC008432.1-201ENST00000615912 1320 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRRM4A7MD48 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRRM4A7MD48 TMSB4XP4-201ENST00000323496 618 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 AL590290.1-201ENST00000405336 380 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 RNU2-50P-201ENST00000410494 143 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 COX5BP7-201ENST00000414780 274 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AL121878.1-201ENST00000418638 859 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC048351.1-201ENST00000420064 602 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 PNRC2P1-201ENST00000423940 420 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 TCEA1P3-201ENST00000443005 880 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AL161636.2-201ENST00000445179 927 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 OR52E7P-201ENST00000452394 933 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC108161.1-201ENST00000461060 402 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 RN7SL51P-201ENST00000468230 285 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 RN7SL423P-201ENST00000486202 304 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 RN7SL205P-201ENST00000490174 284 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC022133.1-201ENST00000490961 571 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SRRM4A7MD48 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC068714.1-201ENST00000559623 800 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 NMNAT1P5-201ENST00000559657 841 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC106730.2-201ENST00000566641 540 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 TMF1P1-201ENST00000576058 373 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 RBM22P1-201ENST00000578589 1214 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.27□□□□□ -1.73
SRRM4A7MD48 MIR3614-201ENST00000581261 86 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC008521.2-201ENST00000591021 259 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC011626.1-201ENST00000604710 562 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 BNIP3P19-201ENST00000605397 577 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC090525.3-201ENST00000605601 189 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC011374.2-201ENST00000607135 526 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC016542.1-201ENST00000608259 493 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AL359513.1-201ENST00000614364 557 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC018926.1-201ENST00000616335 435 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 uc_338.9-201ENST00000617424 182 ntBASIC4.27□□□□□ -1.73
SRRM4A7MD48 AC091932.2-201ENST00000623014 291 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms