Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 AC019072.1-201ENST00000604535 1551 ntBASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 AC108751.5-201ENST00000492880 1336 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 MAPK10-303ENST00000641324 3959 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 AL590762.2-201ENST00000395798 571 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 GTF3AP1-201ENST00000416942 1004 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 RPL12P43-201ENST00000420608 499 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 OR2B7P-201ENST00000429302 934 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 RBMY2QP-201ENST00000429799 1147 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 TRY2P-201ENST00000448860 689 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 MYO5BP2-201ENST00000449815 1277 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 AC079168.2-201ENST00000453977 416 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 RPSAP50-201ENST00000481955 852 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 AC104971.1-201ENST00000495117 578 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 BUD31P1-201ENST00000521828 359 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 OR10G5P-201ENST00000532733 358 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 AC090022.1-201ENST00000546569 311 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 AC073137.1-201ENST00000605636 634 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 MIR6729-201ENST00000618194 65 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 AC005086.4-201ENST00000623065 213 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 HSPA8P18-201ENST00000439846 1928 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 PCAT14-202ENST00000627127 3935 ntBASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.26□□□□□ -1.73
TRAV27A0A087WT01 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 NCLP2-201ENST00000416078 1462 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 MAPK10-320ENST00000641462 6696 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 RNU6-249P-201ENST00000363016 102 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 SNORA51.1-201ENST00000363243 140 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 CHMP1B2P-201ENST00000399581 597 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 GLUD1P9-201ENST00000420997 1173 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 Z74021.1-201ENST00000423610 407 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 AURKAPS2-201ENST00000454983 333 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 RN7SL214P-201ENST00000487317 265 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 BTF3P13-201ENST00000513224 490 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 RNA5SP464-201ENST00000516251 108 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 AC005520.3-201ENST00000602874 370 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 OR7A19P-201ENST00000608051 733 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 MIR6886-201ENST00000619864 61 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 AC091905.4-201ENST00000623432 202 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 AP002799.1-201ENST00000623552 423 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 AL442639.1-201ENST00000625030 1899 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 AC092435.4-201ENST00000623012 4159 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 AL355852.1-201ENST00000454081 1771 ntBASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.25□□□□□ -1.73
TRAV27A0A087WT01 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 RNA5SP123-201ENST00000363244 119 ntBASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 RN7SKP213-201ENST00000410746 298 ntBASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms