Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
PCDHGA1Q9Y5H4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDHGA1Q9Y5H4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDHGA1Q9Y5H4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHGA1Q9Y5H4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHGA1Q9Y5H4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.15□□□□□ -1.59
PCDHGA1Q9Y5H4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 AL031595.2-201ENST00000624215 19071 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 RN7SKP149-201ENST00000363008 344 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 MIR600-201ENST00000385007 98 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 HSPA8P15-201ENST00000401676 786 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 AC096921.1-201ENST00000411661 375 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 AL590806.1-201ENST00000415818 853 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 OR5M12P-201ENST00000423388 929 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 CACYBPP1-201ENST00000438592 684 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 FHP1-201ENST00000442741 703 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 AC092647.2-201ENST00000452998 253 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 RPS29P33-201ENST00000456717 146 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 RN7SL809P-201ENST00000482040 297 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 AC093267.1-201ENST00000489176 961 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 PDCL3P4-201ENST00000489621 720 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 RN7SL205P-201ENST00000490174 284 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 RPL37AP8-201ENST00000494116 276 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 ST13P12-201ENST00000508958 1094 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 AC109464.1-201ENST00000511091 819 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 OR5AM1P-201ENST00000532136 1032 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 MIR4697-201ENST00000582977 78 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 RN7SL52P-201ENST00000584271 284 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 AC060780.2-201ENST00000589047 198 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 AL022394.1-201ENST00000606979 292 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 RN7SL722P-201ENST00000617780 284 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 RN7SL565P-201ENST00000618246 284 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 RPL23AP61-201ENST00000623642 466 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 OR51C1P-202ENST00000641159 1444 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 BCORP1-203ENST00000513194 5093 ntBASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PCDHGA1Q9Y5H4 AC007382.1-201ENST00000624376 2618 ntBASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 AC010329.2-201ENST00000595195 2737 ntBASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 AC004817.4-201ENST00000602396 3625 ntBASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 MIR105-1-201ENST00000385222 81 ntBASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 EIF2S2P3-201ENST00000428356 999 ntBASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 BX276092.6-201ENST00000430476 250 ntBASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 BX276092.8-201ENST00000455722 250 ntBASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 RN7SL591P-201ENST00000496150 292 ntBASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 RN7SKP260-201ENST00000516907 149 ntBASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.13□□□□□ -1.59
PCDHGA1Q9Y5H4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms