Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC005224.3-201ENST00000584683 2140 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC084373.1-201ENST00000603311 235 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 AC068769.1-201ENST00000474767 2426 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 PWAR1-201ENST00000624188 2414 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 MFSD8-239ENST00000641590 2479 ntBASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTDP1Q9Y5B0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 AL355834.1-201ENST00000556602 3965 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 SNORA74A-201ENST00000364089 198 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 RN7SKP6-201ENST00000364795 319 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 OR13C3-201ENST00000374781 1108 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 RNU11-201ENST00000387069 134 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 RPL11P3-201ENST00000395256 523 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 MTCYBP7-201ENST00000419540 1134 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 USP9YP24-201ENST00000434374 697 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 FABP5P3-201ENST00000437960 408 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 CDY12P-201ENST00000440679 1015 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 VN1R25P-201ENST00000443385 738 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 USP9YP17-201ENST00000444617 696 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 CDY13P-201ENST00000445813 1015 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 AC112492.1-201ENST00000449607 712 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 TOMM22P4-201ENST00000511318 336 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 OR4A17P-201ENST00000526032 904 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 AL360012.1-201ENST00000602813 131 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 AL133481.2-203ENST00000607558 139 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 OR51C1P-201ENST00000608504 942 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 AC004232.3-201ENST00000622977 525 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 AC006927.2-201ENST00000639256 389 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 AC144833.1-201ENST00000567953 4089 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 AC017002.4-201ENST00000604721 1525 ntBASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.5□□□□□ -1.37
CTDP1Q9Y5B0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 RNU1-19P-201ENST00000363306 165 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 RNU6-906P-201ENST00000384700 70 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 RPL23AP17-201ENST00000401064 499 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 ST13P16-201ENST00000401760 781 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 RNU4-34P-201ENST00000410431 124 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 MORF4L1P6-201ENST00000418771 268 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 MRPS21P2-201ENST00000424704 264 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 CYCSP6-201ENST00000434498 302 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 MED6P1-201ENST00000439659 713 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 Z99127.2-201ENST00000441426 334 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AC019185.1-201ENST00000442718 389 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AC092155.2-201ENST00000454675 477 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 Y_RNA.688-201ENST00000516565 95 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 MTCO1P47-201ENST00000523889 1271 ntBASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CTDP1Q9Y5B0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms