Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC092868.3-201ENST00000560515 784 ntBASIC5.29□□□□□ -1.56
YIPF1Q9Y548 MIR3667-201ENST00000581025 74 ntBASIC5.29□□□□□ -1.56
YIPF1Q9Y548 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
YIPF1Q9Y548 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
YIPF1Q9Y548 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.29□□□□□ -1.56
YIPF1Q9Y548 uc_338.18-201ENST00000615451 175 ntBASIC5.29□□□□□ -1.56
YIPF1Q9Y548 AL162574.1-201ENST00000615702 950 ntBASIC5.29□□□□□ -1.56
YIPF1Q9Y548 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
YIPF1Q9Y548 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
YIPF1Q9Y548 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
YIPF1Q9Y548 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
YIPF1Q9Y548 AC018628.1-201ENST00000624147 3819 ntBASIC5.29□□□□□ -1.56
YIPF1Q9Y548 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
YIPF1Q9Y548 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
YIPF1Q9Y548 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 SDAD1P1-202ENST00000524156 2051 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AC083837.1-201ENST00000565297 2994 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AL354868.1-201ENST00000417077 482 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AL807761.1-201ENST00000417622 171 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 RPS29P33-201ENST00000456717 146 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AK4P6-201ENST00000505168 528 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 MTND3P24-201ENST00000506306 329 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 RNU6-319P-201ENST00000516025 108 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 HIGD1AP5-201ENST00000529959 259 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 BNIP3P1-201ENST00000547295 580 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AC008147.3-201ENST00000548666 354 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 UBE2FP2-201ENST00000566646 462 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AC016839.1-201ENST00000578162 867 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AL161616.1-201ENST00000611867 286 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 NLRP3P1-201ENST00000622303 1785 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AC004656.1-201ENST00000568479 4951 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AL512283.1-201ENST00000606756 1384 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AC092070.2-203ENST00000598377 3644 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 AP001002.1-201ENST00000625148 1513 ntBASIC5.28□□□□□ -1.56
YIPF1Q9Y548 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
YIPF1Q9Y548 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 SNORA70.10-201ENST00000384515 134 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AL590139.1-201ENST00000416267 400 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC073464.3-201ENST00000422564 712 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 MTCO1P51-201ENST00000427672 1060 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 MTND2P40-201ENST00000436718 841 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 ARL5AP3-201ENST00000439327 386 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 SNRPCP3-201ENST00000474888 476 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 MTND3P3-201ENST00000505004 126 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC098976.1-201ENST00000513014 541 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC112206.4-201ENST00000515142 405 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms