Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 RNU4-34P-201ENST00000410431 124 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 RN7SKP273-201ENST00000411392 314 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 AURKAPS1-201ENST00000451805 1212 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 AC018638.3-201ENST00000461273 132 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 RPL7AP28-201ENST00000464513 571 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 HMGN2P25-201ENST00000486956 268 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 AC109462.1-201ENST00000491087 368 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 AC093763.2-201ENST00000505334 1223 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 SCARNA21.2-201ENST00000516600 166 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 AC092490.3-201ENST00000545370 572 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 AL049830.4-201ENST00000555149 351 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 AC006116.3-201ENST00000592968 361 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 AP003400.2-201ENST00000624036 666 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 LINC01739-205ENST00000641890 573 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 NAMPTP1-201ENST00000440465 2514 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 MTCO1P15-201ENST00000529569 1526 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 RARSP1-201ENST00000542842 1418 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 SNURFL-201ENST00000309296 343 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 Z97832.1-201ENST00000402490 328 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 BX510359.3-201ENST00000422168 306 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 FABP7P1-201ENST00000424004 391 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 SETP10-201ENST00000424368 814 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 CKS1BP6-201ENST00000424932 240 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 NMNAT1P2-201ENST00000435192 860 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 AL627308.1-201ENST00000435693 821 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 RPS26P2-201ENST00000440331 348 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 EEF1B2P5-201ENST00000444820 548 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 MRPL48P1-201ENST00000445390 636 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 NDUFA5P8-201ENST00000449019 346 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 MTCO3P42-201ENST00000509488 518 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 MTCO3P39-201ENST00000514812 518 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 RN7SKP5-201ENST00000517045 272 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 AC234775.3-201ENST00000564612 656 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 AC091979.2-201ENST00000607514 214 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 CASC19-204ENST00000641001 2055 ntBASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRAPPC4Q9Y296 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 U8.4-201ENST00000363626 134 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 MIR765-201ENST00000390226 114 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 ATP5HP3-201ENST00000396994 486 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 MIR1178-201ENST00000408396 91 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.54□□□□□ -1.68
TRAPPC4Q9Y296 RPS29P9-201ENST00000440360 171 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms