Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.72□□□□□ -1.65
CHRNA9Q9UGM1 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CHRNA9Q9UGM1 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CHRNA9Q9UGM1 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CHRNA9Q9UGM1 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CHRNA9Q9UGM1 AL450326.2-201ENST00000421913 1962 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 NUDT19P3-201ENST00000404698 555 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 RNU2-50P-201ENST00000410494 143 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 AP000534.2-201ENST00000412729 568 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 RPA2P2-201ENST00000419698 796 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 CACYBPP1-201ENST00000438592 684 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 SCAND3P1-201ENST00000439854 1060 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 COPS8P2-201ENST00000473228 627 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 AC023424.1-201ENST00000496058 459 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 ACTR6P1-201ENST00000514311 1104 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 OR4V1P-201ENST00000525394 1140 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 AC004825.1-201ENST00000555068 586 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 AC127381.1-201ENST00000555979 939 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 AP005131.7-201ENST00000610087 611 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 MIR6862-1-201ENST00000613016 70 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 MIR6862-2-201ENST00000614755 70 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 AL450345.1-202ENST00000605741 3881 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 MTCO1P11-201ENST00000429111 1528 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 AC007382.1-201ENST00000624376 2618 ntBASIC4.71□□□□□ -1.66
CHRNA9Q9UGM1 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 U3.2-201ENST00000362981 210 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 RN7SKP269-201ENST00000365545 319 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 MIR600-201ENST00000385007 98 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AL512504.1-201ENST00000415494 778 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 MARK2P12-201ENST00000420129 585 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AC099336.2-201ENST00000422457 254 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 RPS4XP16-201ENST00000427198 791 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 MTCO3P21-201ENST00000430791 643 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AL606490.7-201ENST00000433136 191 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AL353597.2-202ENST00000434901 373 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AC099560.2-201ENST00000457554 255 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 MTND3P6-201ENST00000485242 339 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 BTG4P1-201ENST00000510421 183 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 RNU6-491P-201ENST00000516099 110 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AC107918.3-201ENST00000533272 382 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AP005262.1-201ENST00000582646 997 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AC095055.1-201ENST00000603472 1113 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AC135803.1-201ENST00000608748 565 ntBASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.7□□□□□ -1.66
CHRNA9Q9UGM1 AC108359.1-201ENST00000616451 1211 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms