Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRFN1Q9P244 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRFN1Q9P244 HMGB1P20-201ENST00000402555 677 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 RN7SKP293-201ENST00000411389 296 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 GSTM3P2-201ENST00000412746 530 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 MTND4P3-201ENST00000417829 541 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 BX510359.3-201ENST00000422168 306 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 MRPS21P2-201ENST00000424704 264 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC127526.2-201ENST00000426436 775 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 MTCYBP15-201ENST00000433123 1127 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 SUMO2P3-201ENST00000438311 288 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 AL009048.1-201ENST00000450437 298 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC022215.1-201ENST00000481770 362 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 AL136038.1-201ENST00000497246 351 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC091860.1-201ENST00000505723 432 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC098799.3-201ENST00000506095 438 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 RN7SKP288-201ENST00000516227 268 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 HMGB1P23-201ENST00000518743 568 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC022404.1-201ENST00000555320 273 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRFN1Q9P244 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC016180.1-201ENST00000567945 403 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 AP001160.4-201ENST00000596971 382 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC009027.1-201ENST00000604510 479 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 RN7SL544P-201ENST00000617232 284 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 RN7SL763P-201ENST00000620922 284 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 CDRT1-208ENST00000630868 794 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC087565.3-203ENST00000641018 837 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRFN1Q9P244 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRFN1Q9P244 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRFN1Q9P244 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRFN1Q9P244 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRFN1Q9P244 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRFN1Q9P244 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.37□□□□□ -1.55
LRFN1Q9P244 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRFN1Q9P244 CR788268.1-201ENST00000603931 1809 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 AC046144.1-201ENST00000478559 1853 ntBASIC5.37□□□□□ -1.55
LRFN1Q9P244 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
LRFN1Q9P244 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.36□□□□□ -1.55
LRFN1Q9P244 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.36□□□□□ -1.55
LRFN1Q9P244 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRFN1Q9P244 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LRFN1Q9P244 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRFN1Q9P244 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRFN1Q9P244 AC022031.1-201ENST00000585985 2593 ntBASIC5.36□□□□□ -1.55
LRFN1Q9P244 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRFN1Q9P244 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.36□□□□□ -1.55
LRFN1Q9P244 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LRFN1Q9P244 RNA5SP394-201ENST00000364216 119 ntBASIC5.36□□□□□ -1.55
LRFN1Q9P244 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.36□□□□□ -1.55
LRFN1Q9P244 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LRFN1Q9P244 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LRFN1Q9P244 RNU2-50P-201ENST00000410494 143 ntBASIC5.36□□□□□ -1.55
LRFN1Q9P244 RNU6-77P-201ENST00000410554 91 ntBASIC5.36□□□□□ -1.55
LRFN1Q9P244 AC009302.1-201ENST00000417147 390 ntBASIC5.36□□□□□ -1.55
LRFN1Q9P244 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.36□□□□□ -1.55
LRFN1Q9P244 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRFN1Q9P244 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRFN1Q9P244 HMGB3P24-201ENST00000433260 622 ntBASIC5.36□□□□□ -1.55
LRFN1Q9P244 GTF2IP3-201ENST00000433887 494 ntBASIC5.36□□□□□ -1.55
LRFN1Q9P244 AL606490.1-201ENST00000452266 765 ntBASIC5.36□□□□□ -1.55
LRFN1Q9P244 AL603882.1-201ENST00000463059 681 ntBASIC5.36□□□□□ -1.55
LRFN1Q9P244 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRFN1Q9P244 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.36□□□□□ -1.55
LRFN1Q9P244 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.36□□□□□ -1.55
LRFN1Q9P244 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.36□□□□□ -1.55
LRFN1Q9P244 AC008562.1-201ENST00000521763 330 ntBASIC5.36□□□□□ -1.55
LRFN1Q9P244 COX6B1P6-201ENST00000522347 255 ntBASIC5.36□□□□□ -1.55
LRFN1Q9P244 LRRC6P1-201ENST00000532188 885 ntBASIC5.36□□□□□ -1.55
LRFN1Q9P244 YWHABP2-201ENST00000540201 713 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms