Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNU4-12P-201ENST00000365233 139 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 RNA5SP77-201ENST00000365394 120 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 RNU1-46P-201ENST00000384425 164 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CNTN3Q9P232 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CNTN3Q9P232 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 RPL21P50-201ENST00000417698 477 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 CYCSP52-201ENST00000422857 310 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 AC012498.1-201ENST00000424037 437 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 HMGB1P31-201ENST00000437242 427 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 UBE2V1P3-201ENST00000439651 417 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 ARL5AP2-201ENST00000444698 533 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CNTN3Q9P232 BZW1P1-201ENST00000454901 1240 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 AC002075.1-201ENST00000457396 676 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 MARK2P8-201ENST00000476069 952 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 RPL9P6-201ENST00000492764 598 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 AC105252.1-201ENST00000503089 286 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 FAM92A1P2-202ENST00000504766 877 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CNTN3Q9P232 RPL7L1P4-201ENST00000513004 707 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 AC022483.1-201ENST00000514020 567 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 OR8Q1P-201ENST00000526467 655 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 AC024405.1-201ENST00000532521 1042 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 AP002453.2-201ENST00000533503 320 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 AC124947.2-202ENST00000552735 133 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 GTF2IP22-201ENST00000554443 182 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 MIR6085-201ENST00000618314 110 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 AC004009.2-201ENST00000623016 728 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 LINC02495-203ENST00000636704 242 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 U6.107-201ENST00000637108 79 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 LRRC77P-213ENST00000637727 880 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNTN3Q9P232 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNTN3Q9P232 PABPC1P9-201ENST00000426076 1612 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 AC023245.2-201ENST00000530760 2978 ntBASIC7.04□□□□□ -1.28
CNTN3Q9P232 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CNTN3Q9P232 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.04□□□□□ -1.28
CNTN3Q9P232 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNTN3Q9P232 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNTN3Q9P232 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNTN3Q9P232 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNTN3Q9P232 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CNTN3Q9P232 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CNTN3Q9P232 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CNTN3Q9P232 AL161901.1-201ENST00000624954 3425 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CNTN3Q9P232 AL590763.1-201ENST00000398297 1545 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CNTN3Q9P232 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CNTN3Q9P232 OR2M1P-201ENST00000318104 951 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 RNU4-76P-201ENST00000364509 141 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 ESD-201ENST00000378697 1079 ntTSL 5 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 AL391419.1-201ENST00000398901 1275 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 PSMA6P1-201ENST00000400275 741 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 OR51A5P-201ENST00000415429 942 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 AC234781.4-201ENST00000419384 244 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 MTCO3P1-205ENST00000422088 832 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CNTN3Q9P232 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 COX4I1P2-201ENST00000447446 547 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 RN7SL649P-201ENST00000496974 275 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 OR5H5P-201ENST00000503164 928 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 AC138866.2-201ENST00000508650 584 ntBASIC7.03□□□□□ -1.28
CNTN3Q9P232 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CNTN3Q9P232 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.03□□□□□ -1.28
CNTN3Q9P232 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms