Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC88CQ9P219 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC88CQ9P219 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC88CQ9P219 TPT1P12-201ENST00000448968 492 ntBASIC4.64□□□□□ -1.67
CCDC88CQ9P219 SLC25A18P1-201ENST00000449385 454 ntBASIC4.64□□□□□ -1.67
CCDC88CQ9P219 AC063943.1-201ENST00000465434 453 ntBASIC4.64□□□□□ -1.67
CCDC88CQ9P219 AC073358.1-201ENST00000505671 684 ntBASIC4.64□□□□□ -1.67
CCDC88CQ9P219 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC88CQ9P219 MIR4277-201ENST00000578298 84 ntBASIC4.64□□□□□ -1.67
CCDC88CQ9P219 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
CCDC88CQ9P219 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC88CQ9P219 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC88CQ9P219 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC88CQ9P219 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC88CQ9P219 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC88CQ9P219 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC88CQ9P219 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC88CQ9P219 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AC126755.2-208ENST00000327792 462 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AC138969.1-213ENST00000331436 462 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 ATG4AP1-201ENST00000416893 538 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 TXNP2-201ENST00000443918 295 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 OR52J1P-201ENST00000450596 932 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 RPS29P22-201ENST00000472363 168 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 SCARNA22-201ENST00000503991 125 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AC104785.1-201ENST00000603220 588 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AC023632.6-201ENST00000624338 2177 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 RN7SKP74-201ENST00000362849 309 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 RNU1-82P-201ENST00000390851 165 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 RPA2P2-201ENST00000419698 796 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 E2F6P2-201ENST00000420708 748 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 HMGB1P32-201ENST00000425971 565 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 CYCSP11-201ENST00000436426 315 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 RPS29P9-201ENST00000440360 171 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AC025674.1-201ENST00000507074 324 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 UBE2FP2-201ENST00000566646 462 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 MIR5699-201ENST00000578903 90 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AC234771.5-201ENST00000600161 514 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AC012414.7-202ENST00000622705 1090 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AC012618.3-205ENST00000637896 1496 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 AC093849.1-201ENST00000563631 2209 ntBASIC4.63□□□□□ -1.67
CCDC88CQ9P219 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 MIR192-201ENST00000384915 110 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 FAR2P2-201ENST00000413041 594 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 CHEK2P3-201ENST00000416118 248 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 FAR2P4-202ENST00000425399 584 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 NRBF2P3-201ENST00000432731 865 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 CEACAMP9-201ENST00000442990 513 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 AC079168.2-201ENST00000453977 416 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 TPT1P1-201ENST00000458495 518 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 MIR3936-201ENST00000584304 110 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 AC087821.1-201ENST00000623639 567 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 AC132825.1-201ENST00000463573 2247 ntBASIC4.62□□□□□ -1.67
CCDC88CQ9P219 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC88CQ9P219 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms