Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.18□□□□□ -1.58
TM9SF3Q9HD45 AC112694.2-201ENST00000623697 768 ntBASIC5.18□□□□□ -1.58
TM9SF3Q9HD45 AC012618.3-205ENST00000637896 1496 ntBASIC5.18□□□□□ -1.58
TM9SF3Q9HD45 AL450326.2-201ENST00000421913 1962 ntBASIC5.18□□□□□ -1.58
TM9SF3Q9HD45 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
TM9SF3Q9HD45 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TM9SF3Q9HD45 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
TM9SF3Q9HD45 AC100757.1-201ENST00000616872 1835 ntBASIC5.18□□□□□ -1.58
TM9SF3Q9HD45 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.18□□□□□ -1.58
TM9SF3Q9HD45 AC025574.1-201ENST00000554784 1653 ntBASIC5.18□□□□□ -1.58
TM9SF3Q9HD45 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.18□□□□□ -1.58
TM9SF3Q9HD45 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 COX6B1P1-201ENST00000415962 213 ntBASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AC016772.1-201ENST00000444170 1261 ntBASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AC099063.2-201ENST00000446360 662 ntBASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 NDUFA5P8-201ENST00000449019 346 ntBASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 MTCYBP14-201ENST00000457471 715 ntBASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 GYG1P1-201ENST00000460864 698 ntBASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AC020779.1-201ENST00000478757 796 ntBASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 RPL7P16-201ENST00000479738 738 ntBASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AL133372.1-201ENST00000493565 745 ntBASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AC113398.2-201ENST00000507630 558 ntBASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 RN7SKP260-201ENST00000516907 149 ntBASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 MIR4691-201ENST00000583764 85 ntBASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AC087283.1-201ENST00000604029 1074 ntBASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AP003400.3-201ENST00000624904 346 ntBASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TM9SF3Q9HD45 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 MTCO1P22-201ENST00000604619 1360 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 RNU4-7P-201ENST00000364758 141 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AL512430.2-201ENST00000406786 339 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 OR2AM1P-201ENST00000422137 422 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 HSPD1P12-201ENST00000429127 1069 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 USP9YP9-201ENST00000429406 715 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 RPS29P10-201ENST00000439197 166 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AL035551.1-201ENST00000446931 348 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AC243772.1-201ENST00000451620 410 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AC006463.2-201ENST00000473326 348 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AC016559.2-201ENST00000510759 359 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 SCARNA20.4-201ENST00000516969 131 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AC092709.1-201ENST00000521355 1045 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AC022616.2-201ENST00000523185 300 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AC008033.2-201ENST00000542626 177 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AC137768.1-201ENST00000549998 553 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 MIR4330-201ENST00000579077 105 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AP005262.1-201ENST00000582646 997 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AC244107.2-201ENST00000611773 76 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AL627230.1-201ENST00000613077 211 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AL591926.8-201ENST00000616876 211 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 AC091932.2-201ENST00000623014 291 ntBASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TM9SF3Q9HD45 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms